RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PKNOX2Q96KN3 472 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 GPR22Q99680 433 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 CENPHQ9H3R5 247 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 C8orf33Q9H7E9 229 aaPredicted RBP10.39□□□□□ -0.75
TPM3-217ENST00000504663 ZFATQ9P243 1243 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 DUSP12Q9UNI6 340 aa10.39□□□□□ -0.75
TPM3-217ENST00000504663 MTF2Q9Y483 593 aaPredicted RBP10.39□□□□□ -0.75
TPM3-217ENST00000504663 TRBV5-4A0A0C4DH59 114 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 A0A1W2PQ67 120 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 GOLGA6L10A6NI86 522 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 AGAP14A8MT82 685 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 CRTAMO95727 393 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 TOP3BO95985 862 aaKnown RBP10.38□□□□□ -0.75
TPM3-217ENST00000504663 ITGA2BP08514 1039 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 BPIP17213 487 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 PAMP19021 973 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 VIPR1P32241 457 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 NNMTP40261 264 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 WASP42768 502 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 LEPRP48357 1165 aaKnown RBP10.38□□□□□ -0.75
TPM3-217ENST00000504663 CDKN1CP49918 316 aaPredicted RBP10.38□□□□□ -0.75
TPM3-217ENST00000504663 SERPINB9P50453 376 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 NEK3P51956 506 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 PGGT1BP53609 377 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 PPP2R2AP63151 447 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 RAD51Q06609 339 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 GPS2Q13227 327 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 TDGQ13569 410 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 LAMB3Q13751 1172 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 ZKSCAN8Q15776 578 aaPredicted RBP10.38□□□□□ -0.75
TPM3-217ENST00000504663 HSP90B2PQ58FF3 399 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 PIP5KL1Q5T9C9 394 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 GRTP1Q5TC63 336 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 ZNF470Q6ECI4 717 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 PSAPL1Q6NUJ1 521 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 ZNF549Q6P9A3 640 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 AFTPHQ6ULP2 937 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 CDHR3Q6ZTQ4 885 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 KIAA0408Q6ZU52 694 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 STRA8Q7Z7C7 330 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 C4orf33Q8N1A6 199 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 DCLK2Q8N568 766 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 ZNF513Q8N8E2 541 aaPredicted RBP10.38□□□□□ -0.75
TPM3-217ENST00000504663 BANPQ8N9N5 519 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 GPR26Q8NDV2 337 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 DENND1AQ8TEH3 1009 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 UCMAQ8WVF2 138 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 OR8D1Q8WZ84 308 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 CDKL2Q92772 493 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 VPS39Q96JC1 886 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 FAM167BQ9BTA0 163 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 RSPH9Q9H1X1 276 aaPredicted RBP10.38□□□□□ -0.75
TPM3-217ENST00000504663 RHOJQ9H4E5 214 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 ZFYVE1Q9HBF4 777 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 BPIFA1Q9NP55 256 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 PCDH12Q9NPG4 1184 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 FBXO6Q9NRD1 293 aaPredicted RBP10.38□□□□□ -0.75
TPM3-217ENST00000504663 MKS1Q9NXB0 559 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 BCCIPQ9P287 314 aaKnown RBP eCLIP10.38□□□□□ -0.75
TPM3-217ENST00000504663 NFKBIL1Q9UBC1 381 aaPredicted RBP10.38□□□□□ -0.75
TPM3-217ENST00000504663 FBXO5Q9UKT4 447 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 TMPRSS11EQ9UL52 423 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 PLA2G4CQ9UP65 541 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 ITM2BQ9Y287 266 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 MED16Q9Y2X0 877 aa10.38□□□□□ -0.75
TPM3-217ENST00000504663 MTO1Q9Y2Z2 717 aaKnown RBP10.38□□□□□ -0.75
TPM3-217ENST00000504663 C1orf232A0A0U1RR37 186 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 IQANK1A0A1B0GTG1 560 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 C2orf81A6NN90 581 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 C10orf142B7Z368 130 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 TPP1O14773 563 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 NPC1O15118 1278 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 PRPF4O43172 522 aaKnown RBP eCLIP10.37□□□□□ -0.75
TPM3-217ENST00000504663 HAUS5O94927 633 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 SLC4A1P02730 911 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 PRNPP04156 253 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 EPHX1P07099 455 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 SNRPAP09012 282 aaKnown RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 GLULP15104 373 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 OGNP20774 298 aaKnown RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 DRD1P21728 446 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 CNTFP26441 200 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 MC4RP32245 332 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 TIE1P35590 1138 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 RECQLP46063 649 aaPredicted RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 EPHB1P54762 984 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 SEC13P55735 322 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 TAS2R38P59533 333 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 SKIDA1Q1XH10 827 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 POM121L1PQ3SYA9 428 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 PREPLQ4J6C6 727 aaPredicted RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 SETMARQ53H47 684 aaPredicted RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 RBM20Q5T481 1227 aaKnown RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 CNSTQ6PJW8 725 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 USP45Q70EL2 814 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 HSD11B1LQ7Z5J1 315 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 PTAR1Q7Z6K3 402 aaPredicted RBP10.37□□□□□ -0.75
TPM3-217ENST00000504663 CMC1Q7Z7K0 106 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 CLEC14AQ86T13 490 aa10.37□□□□□ -0.75
TPM3-217ENST00000504663 LMNTD2Q8IXW0 634 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms