RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ZSCAN5DPP0CG00 497 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 ATXN3P54252 364 aaPredicted RBP25.08■■□□□ 1.61
LSM6-202ENST00000502781 SEMA5AQ13591 1074 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 INPP5AQ14642 412 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 TPRG1LQ5T0D9 272 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 STPG1Q5TH74 334 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 C4orf22Q6V702 233 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 PTAR1Q7Z6K3 402 aaPredicted RBP25.08■■□□□ 1.61
LSM6-202ENST00000502781 NRSN1Q8IZ57 195 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 PELI3Q8N2H9 469 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 TBL1YQ9BQ87 522 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 LRRC40Q9H9A6 602 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 SHOC2Q9UQ13 582 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 LAMA1P25391 3075 aa25.08■■□□□ 1.61
LSM6-202ENST00000502781 GOLGA6L10A0A0M3HER8 536 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 SPTY2D1-AS1A0A0U1RR47 76 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 RGSL1A5PLK6 1076 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 GOLGA8CPA6NN73 597 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 PSMD3O43242 534 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 ZNF883P0CG24 379 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 TEAD1P28347 426 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 SPINT3P49223 89 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 FNTAP49354 379 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 PNCKQ6P2M8 343 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 SYT10Q6XYQ8 523 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 PDCD7Q8N8D1 485 aaKnown RBP25.07■■□□□ 1.6
LSM6-202ENST00000502781 CCHCR1Q8TD31 782 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 ELF4Q99607 663 aaPredicted RBP25.07■■□□□ 1.6
LSM6-202ENST00000502781 APOL2Q9BQE5 337 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 ABCG8Q9H221 673 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 IL21RQ9HBE5 538 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 HACD3Q9P035 362 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 RNF14Q9UBS8 474 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 FNDC3AQ9Y2H6 1198 aaKnown RBP25.07■■□□□ 1.6
LSM6-202ENST00000502781 ADAMTS9Q9P2N4 1935 aa25.07■■□□□ 1.6
LSM6-202ENST00000502781 C4orf47A7E2U8 309 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 AURKAO14965 403 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 DFNA5O60443 496 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 PCCBP05166 539 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 CASQ1P31415 396 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 HMGCLP35914 325 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 SPARCL1Q14515 664 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 CCDC137Q6PK04 289 aaKnown RBP25.06■■□□□ 1.6
LSM6-202ENST00000502781 GSTA5Q7RTV2 222 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 TTC30BQ8N4P2 665 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 TAB3Q8N5C8 712 aaPredicted RBP25.06■■□□□ 1.6
LSM6-202ENST00000502781 SCAMP4Q969E2 229 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 TRIM44Q96DX7 344 aaPredicted RBP25.06■■□□□ 1.6
LSM6-202ENST00000502781 NFKBIL1Q9UBC1 381 aaPredicted RBP25.06■■□□□ 1.6
LSM6-202ENST00000502781 FEZ2Q9UHY8 353 aaPredicted RBP25.06■■□□□ 1.6
LSM6-202ENST00000502781 NEU2Q9Y3R4 380 aa25.06■■□□□ 1.6
LSM6-202ENST00000502781 K7ESM1 405 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 USP12O75317 370 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 SUN1O94901 812 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 SOD1P00441 154 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 HOXC4P09017 264 aaPredicted RBP25.05■■□□□ 1.6
LSM6-202ENST00000502781 RXRGP48443 463 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 PDE1CQ14123 709 aaPredicted RBP25.05■■□□□ 1.6
LSM6-202ENST00000502781 FZD2Q14332 565 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 SHBQ15464 509 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 OXR1Q8N573 874 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 LRRC45Q96CN5 670 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 CAPZA3Q96KX2 299 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 APOOQ9BUR5 198 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 GPR63Q9BZJ6 419 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 RAB6BQ9NRW1 208 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 PKD2L2Q9NZM6 624 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 A0A1B0GTQ1 180 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 PDE2AO00408 941 aaPredicted RBP25.05■■□□□ 1.6
LSM6-202ENST00000502781 TSHRP16473 764 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 PRAMEF14Q5SWL7 426 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 HENMT1Q5T8I9 393 aaKnown RBP25.05■■□□□ 1.6
LSM6-202ENST00000502781 AP2M1Q96CW1 435 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 CDH19Q9H159 772 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 CD84Q9UIB8 345 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 OR1A2Q9Y585 309 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 CFAP54Q96N23 3096 aa25.05■■□□□ 1.6
LSM6-202ENST00000502781 ASCC3Q8N3C0 2202 aaKnown RBP25.04■■□□□ 1.6
LSM6-202ENST00000502781 KIAA1024LP59773 190 aa25.04■■□□□ 1.6
LSM6-202ENST00000502781 DCDC1P59894 354 aa25.04■■□□□ 1.6
LSM6-202ENST00000502781 SLC14A1Q13336 389 aa25.04■■□□□ 1.6
LSM6-202ENST00000502781 BLOC1S5Q8TDH9 187 aa25.04■■□□□ 1.6
LSM6-202ENST00000502781 SLCO2A1Q92959 643 aa25.04■■□□□ 1.6
LSM6-202ENST00000502781 FUBP1Q96AE4 644 aaKnown RBP25.04■■□□□ 1.6
LSM6-202ENST00000502781 RIOK2Q9BVS4 552 aaKnown RBP25.04■■□□□ 1.6
LSM6-202ENST00000502781 TEX101Q9BY14 249 aa25.04■■□□□ 1.6
LSM6-202ENST00000502781 EIF2B3Q9NR50 452 aaKnown RBP25.04■■□□□ 1.6
LSM6-202ENST00000502781 TM7SF3Q9NS93 570 aa25.04■■□□□ 1.6
LSM6-202ENST00000502781 IL17CQ9P0M4 197 aa25.04■■□□□ 1.6
LSM6-202ENST00000502781 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.03■■□□□ 1.6
LSM6-202ENST00000502781 SLC30A4O14863 429 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 TM4SF5O14894 197 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 THOP1P52888 689 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 PTK2BQ14289 1009 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 NFATC4Q14934 902 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 MACC1Q6ZN28 852 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 DBX2Q6ZNG2 339 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 LINC00523Q86TU6 105 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 PARGQ86W56 976 aa25.03■■□□□ 1.6
LSM6-202ENST00000502781 GPR26Q8NDV2 337 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms