RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 USP6NLQ92738 828 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 GRAMD2BQ96HH9 432 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 MED30Q96HR3 178 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 ACOX2Q99424 681 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 TMEM47Q9BQJ4 181 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 SEBOXQ9HB31 216 aaPredicted RBP4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 RANGRFQ9HD47 186 aaPredicted RBP4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 DIAPH3Q9NSV4 1193 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 BLOC1S4Q9NUP1 217 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 C1RLQ9NZP8 487 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 DLGAP2Q9P1A6 1054 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 SNX9Q9Y5X1 595 aa4.29□□□□□ -1.72
CDC42SE2-204ENST00000502639 ITIH6Q6UXX5 1313 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 C1orf226A1L170 272 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 DOK2O60496 412 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 KDM4BO94953 1096 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 PAPSS2O95340 614 aaPredicted RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 OR2C1O95371 312 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 DDX58O95786 925 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 KRT10P13645 584 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 ZNF182P17025 639 aaPredicted RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 NFKBIAP25963 317 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 TM4SF1P30408 202 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 TUBA1BP68363 451 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 NIPAL4Q0D2K0 466 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 TRAF2Q12933 501 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 OASLQ15646 514 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 ZNF324BQ6AW86 544 aaPredicted RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 ZNF280DQ6N043 979 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 METTL2BQ6P1Q9 378 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 SLC36A4Q6YBV0 504 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 NEK10Q6ZWH5 1172 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 DPPA4Q7L190 304 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 C16orf82Q7Z2V1 217 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 ARHGEF2Q92974 986 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 SMARCE1Q969G3 411 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 METTL2AQ96IZ6 378 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 THOC3Q96J01 351 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 PCYT2Q99447 389 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 IFIH1Q9BYX4 1025 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 UBA5Q9GZZ9 404 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 ZHX3Q9H4I2 956 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 C17orf75Q9HAS0 396 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 LTB4R2Q9NPC1 389 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 CD93Q9NPY3 652 aa4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 SEPT11Q9NVA2 429 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-204ENST00000502639 ATXN2Q99700 1313 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 ARHGEF40Q8TER5 1519 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 FRMD3A2A2Y4 597 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 BTBD18B2RXH4 712 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 GAGE7O76087 117 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 CCNDBP1O95273 360 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 GAGE12FP0CL80 117 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 GAGE12GP0CL81 117 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 GAGE12IP0CL82 117 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 T-ENOLP0DO92 83 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 UBA7P41226 1012 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 HNRNPH2P55795 449 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 ZNF155Q12901 538 aaPredicted RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 FOXD4Q12950 439 aaPredicted RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 DLG1Q12959 904 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 GAGE1Q13065 139 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 GAGE4Q13068 117 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 EIF4A2Q14240 407 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 MAPRE1Q15691 268 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 HLFQ16534 295 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 KRT24Q2M2I5 525 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 LRIF1Q5T3J3 769 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 GGNBP1Q5YKI7 109 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 PDXDC1Q6P996 788 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 CRELD2Q6UXH1 353 aaPredicted RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 IKBIPQ70UQ0 350 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 SATL1Q86VE3 508 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 ZNF34Q8IZ26 560 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 BEST3Q8N1M1 668 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 LILRB1Q8NHL6 650 aaPredicted RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 WFIKKN2Q8TEU8 576 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 ZKSCAN4Q969J2 545 aaPredicted RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 ARHGEF26Q96DR7 871 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 RRNAD1Q96FB5 475 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 C1orf74Q96LT6 269 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 TMEM68Q96MH6 324 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 MMTAG2Q9BU76 263 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 SLC28A3Q9HAS3 691 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 KRT84Q9NSB2 600 aa4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 ACSS1Q9NUB1 689 aaPredicted RBP4.27□□□□□ -1.73
CDC42SE2-204ENST00000502639 ZNF587BE7ETH6 402 aa4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 MID1O15344 667 aa4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 IPO7O95373 1038 aaKnown RBP4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 SCGB1D1O95968 90 aa4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 LINC00271P0C7V0 271 aa4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 SRCP12931 536 aa4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 HADHAP40939 763 aa4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 KCNJ4P48050 445 aa4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 RAD23BP54727 409 aa4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 MAMLD1Q13495 774 aa4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 SF3B4Q15427 424 aaKnown RBP eCLIP4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 SOWAHCQ53LP3 525 aaPredicted RBP4.26□□□□□ -1.73
CDC42SE2-204ENST00000502639 GKAP1Q5VSY0 366 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms