RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 AP2M1Q96CW1 435 aa16.74■□□□□ 0.27
PRKCB-210ENST00000498739 SRPK1Q96SB4 655 aaKnown RBP16.74■□□□□ 0.27
PRKCB-210ENST00000498739 TBL1YQ9BQ87 522 aa16.74■□□□□ 0.27
PRKCB-210ENST00000498739 AP1M1Q9BXS5 423 aa16.74■□□□□ 0.27
PRKCB-210ENST00000498739 ABCG8Q9H221 673 aa16.74■□□□□ 0.27
PRKCB-210ENST00000498739 DNAJC28Q9NX36 388 aa16.74■□□□□ 0.27
PRKCB-210ENST00000498739 DLL3Q9NYJ7 618 aa16.74■□□□□ 0.27
PRKCB-210ENST00000498739 PKD2L2Q9NZM6 624 aa16.74■□□□□ 0.27
PRKCB-210ENST00000498739 TTC7AQ9ULT0 858 aaPredicted RBP16.74■□□□□ 0.27
PRKCB-210ENST00000498739 DRG1Q9Y295 367 aaKnown RBP16.74■□□□□ 0.27
PRKCB-210ENST00000498739 RIF1Q5UIP0 2472 aaKnown RBP16.74■□□□□ 0.27
PRKCB-210ENST00000498739 K7ESM1 405 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 YKT6O15498 198 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 SDC3O75056 442 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 USP12O75317 370 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 CD59P13987 128 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 ETS1P14921 441 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 TSHRP16473 764 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 EPHA8P29322 1005 aaPredicted RBP16.73■□□□□ 0.27
PRKCB-210ENST00000498739 ADRA1AP35348 466 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 RXRGP48443 463 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 SPARCL1Q14515 664 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 PUM1Q14671 1186 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRKCB-210ENST00000498739 SUZ12Q15022 739 aaKnown RBP16.73■□□□□ 0.27
PRKCB-210ENST00000498739 MACC1Q6ZN28 852 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 GATAD2AQ86YP4 633 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 NRSN1Q8IZ57 195 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 GLIS1Q8NBF1 620 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 ACTRT1Q8TDG2 376 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 BLOC1S5Q8TDH9 187 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 SCAMP4Q969E2 229 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 WDR26Q9H7D7 661 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 PCDHGB2Q9Y5G2 931 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 PIEZO1Q92508 2521 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 TMEM131Q92545 1883 aa16.73■□□□□ 0.27
PRKCB-210ENST00000498739 TP53BP1Q12888 1972 aaPredicted RBP16.73■□□□□ 0.27
PRKCB-210ENST00000498739 PI4KAP42356 2102 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 DCDC2BA2VCK2 349 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 CTAGE9A4FU28 777 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 CACNB4O00305 520 aaPredicted RBP16.72■□□□□ 0.27
PRKCB-210ENST00000498739 TM4SF5O14894 197 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 AURKAO14965 403 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 HTR1BP28222 390 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 GPR1P46091 355 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 SPINT3P49223 89 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 DPTQ07507 201 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 BNIP3Q12983 259 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 NFATC4Q14934 902 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 PAPD7Q5XG87 772 aaKnown RBP16.72■□□□□ 0.27
PRKCB-210ENST00000498739 ENPP7Q6UWV6 458 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 RANBP10Q6VN20 620 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 ZNF765Q7L2R6 523 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 GLT6D1Q7Z4J2 308 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 TMC3Q7Z5M5 1100 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 NAXDQ8IW45 347 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 KLHDC8BQ8IXV7 354 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 RAVER1Q8IY67 606 aaKnown RBP16.72■□□□□ 0.27
PRKCB-210ENST00000498739 PDCD7Q8N8D1 485 aaKnown RBP16.72■□□□□ 0.27
PRKCB-210ENST00000498739 SETD7Q8WTS6 366 aaKnown RBP16.72■□□□□ 0.27
PRKCB-210ENST00000498739 FUBP1Q96AE4 644 aaKnown RBP16.72■□□□□ 0.27
PRKCB-210ENST00000498739 EID2BQ96D98 161 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 RIOK2Q9BVS4 552 aaKnown RBP16.72■□□□□ 0.27
PRKCB-210ENST00000498739 TRABDQ9H4I3 376 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 CAAP1Q9H8G2 361 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 LRRC40Q9H9A6 602 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 HACD3Q9P035 362 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 PAK5Q9P286 719 aa16.72■□□□□ 0.27
PRKCB-210ENST00000498739 E7EVH7 732 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 H3BM21 787 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 FLRT2O43155 660 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 PSMD3O43242 534 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 SH3BP5O60239 455 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 PCDHGA12O60330 932 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 CSF2P04141 144 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 ZSCAN5DPP0CG00 497 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 KCNA4P22459 653 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 RPL22P35268 128 aaKnown RBP16.71■□□□□ 0.27
PRKCB-210ENST00000498739 TRIM23P36406 574 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 FDFT1P37268 417 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 LMAN1P49257 510 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 KIAA1024LP59773 190 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 EIF2B5Q13144 721 aaKnown RBP16.71■□□□□ 0.27
PRKCB-210ENST00000498739 KCTD11Q693B1 232 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 HEATR4Q86WZ0 1026 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 DEFB124Q8NES8 71 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 SAP25Q8TEE9 199 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 MAGOHBQ96A72 148 aaKnown RBP16.71■□□□□ 0.27
PRKCB-210ENST00000498739 CAPZA3Q96KX2 299 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 WDR92Q96MX6 357 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 AGAP2Q99490 1192 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 LGR4Q9BXB1 951 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 FAM83DQ9H4H8 585 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 ETNK1Q9HBU6 452 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 RAB6BQ9NRW1 208 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 PHPT1Q9NRX4 125 aaPredicted RBP16.71■□□□□ 0.27
PRKCB-210ENST00000498739 SAR1BQ9Y6B6 198 aa16.71■□□□□ 0.27
PRKCB-210ENST00000498739 GOLGA6L10A0A0M3HER8 536 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 RGSL1A5PLK6 1076 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 PIAS2O75928 621 aa16.7■□□□□ 0.26
PRKCB-210ENST00000498739 AP2A1O95782 977 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms