RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 SDR42E2A6NKP2 422 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 LDB2O43679 373 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 RECQL5O94762 991 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-227ENST00000498056 PCCBP05166 539 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 ADRA1DP25100 572 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 HMGCLP35914 325 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 PDE1BQ01064 536 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 MSLNQ13421 630 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-227ENST00000498056 LAMB3Q13751 1172 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 CDKN3Q16667 212 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 TMEM259Q4ZIN3 620 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 SETMARQ53H47 684 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-227ENST00000498056 PCID2Q5JVF3 399 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 TSTD2Q5T7W7 516 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 NEK5Q6P3R8 708 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 CES3Q6UWW8 571 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 CAPN12Q6ZSI9 719 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 RFLNAQ6ZTI6 216 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 Q6ZVL8 140 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 TMC3Q7Z5M5 1100 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 TMEFF1Q8IYR6 380 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 DTD2Q96FN9 168 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 COQ10AQ96MF6 247 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 C1QTNF7Q9BXJ2 289 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 CHRAC1Q9NRG0 131 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 FKBPLQ9UIM3 349 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 SOX13Q9UN79 622 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-227ENST00000498056 TDRD6O60522 2096 aaKnown RBP13.55□□□□□ -0.24
CPNE1-227ENST00000498056 ATXN2Q99700 1313 aaKnown RBP13.55□□□□□ -0.24
CPNE1-227ENST00000498056 GON4LQ3T8J9 2241 aa13.55□□□□□ -0.24
CPNE1-227ENST00000498056 WNT9AO14904 365 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 SLC31A1O15431 190 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 IGHV4-34P06331 123 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 BPIP17213 487 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 GM2AP17900 193 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 PGAM1P18669 254 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 TNFRSF8P28908 595 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 SPAM1P38567 509 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 ELK3P41970 407 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 SPINT3P49223 89 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 NUBP1P53384 320 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 VSNL1P62760 191 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 PTSQ03393 145 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 SGCGQ13326 291 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 FGL2Q14314 439 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-227ENST00000498056 IRF4Q15306 451 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 ZNF284Q2VY69 593 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 RAET1GQ6H3X3 334 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 FAM151BQ6UXP7 276 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 PRR23BQ6ZRT6 265 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 LPCAT2Q7L5N7 544 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 C11orf74Q86VG3 221 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 FBXO36Q8NEA4 188 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 STYXQ8WUJ0 223 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
CPNE1-227ENST00000498056 BIRC7Q96CA5 298 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 EID2BQ96D98 161 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 ZNF778Q96MU6 729 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 WDR83Q9BRX9 315 aaKnown RBP13.54□□□□□ -0.24
CPNE1-227ENST00000498056 SLC17A9Q9BYT1 436 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 FOXP3Q9BZS1 431 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 PCED1AQ9H1Q7 454 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
CPNE1-227ENST00000498056 IL17CQ9P0M4 197 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 SLC2A6Q9UGQ3 507 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 PCDHGA2Q9Y5H1 932 aa13.54□□□□□ -0.24
CPNE1-227ENST00000498056 BPTFQ12830 3046 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 GLYATL1P3A0A0U1RQE8 302 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 MROH6A6NGR9 719 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 E7ESA3 106 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 EIF3HO15372 352 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPNE1-227ENST00000498056 PRAMEF1O95521 474 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 MYBL2P10244 700 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 HNRNPA2B1P22626 353 aaKnown RBP13.53□□□□□ -0.24
CPNE1-227ENST00000498056 MCM3P25205 808 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 NMBRP28336 390 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 HADHAP40939 763 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 DHPSP49366 369 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-227ENST00000498056 CCR5P51681 352 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 PRAMEP78395 509 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 PMS2CLQ68D20 193 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 ZC3H14Q6PJT7 736 aaKnown RBP13.53□□□□□ -0.24
CPNE1-227ENST00000498056 CEP128Q6ZU80 1094 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 MICALCLQ6ZW33 695 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 NLRP9Q7RTR0 991 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 RGL4Q8IZJ4 473 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 OTUD6BQ8N6M0 293 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 GPR161Q8N6U8 529 aaKnown RBP13.53□□□□□ -0.24
CPNE1-227ENST00000498056 GPR26Q8NDV2 337 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 NELL1Q92832 810 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 SCAMP4Q969E2 229 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 AP2M1Q96CW1 435 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 LRRC39Q96DD0 335 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 MFSD3Q96ES6 412 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 SIGLEC10Q96LC7 697 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 C9orf72Q96LT7 481 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 EBNA1BP2Q99848 306 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms