RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 CDH22Q9UJ99 828 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ERVW-1Q9UQF0 538 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 VPS9D1Q9Y2B5 631 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ARL2BPQ9Y2Y0 163 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 STARD13Q9Y3M8 1113 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 PKP3Q9Y446 797 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 A0A0J9YYE9 177 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 HEPACAM2A8MVW5 462 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 RFXAPO00287 272 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 TRAFD1O14545 582 aaPredicted RBP8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 PFDN6O15212 129 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 LINC01565O15544 149 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 HAUS5O94927 633 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 IL1BP01584 269 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 TRBC1P01850 177 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 UGT2B4P06133 528 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 MYL2P10916 166 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 FCARP24071 287 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 CRABP2P29373 138 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 PMLP29590 882 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 ALDH3A1P30838 453 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 SLC8A1P32418 973 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 ABL2P42684 1182 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 GLRBP48167 497 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 CSRP3P50461 194 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 HNRNPH2P55795 449 aaKnown RBP8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 TAS2R39P59534 338 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 BST1Q10588 318 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 HYAL1Q12794 435 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 GEN1Q17RS7 908 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 ZRANB3Q5FWF4 1079 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 DGKKQ5KSL6 1271 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 GRAMD4Q6IC98 578 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 ANKRD54Q6NXT1 300 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 ZCCHC23Q6ZST2 131 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 CCDC121Q6ZUS5 278 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 PIGWQ7Z7B1 504 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 GPR149Q86SP6 731 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 SDCCAG8Q86SQ7 713 aaPredicted RBP8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 ADIPOR2Q86V24 386 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 C12orf40Q86WS4 652 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 CEP97Q8IW35 865 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 TDHQ8IZJ6 230 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 CENPLQ8N0S6 344 aaPredicted RBP8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 CPA6Q8N4T0 437 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 RDH11Q8TC12 318 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 CYB5D2Q8WUJ1 264 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 C10orf82Q8WW14 230 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 PIH1D2Q8WWB5 315 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 SCG3Q8WXD2 468 aaKnown RBP8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 THOC1Q96FV9 657 aaKnown RBP8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 CDKN2AIPNLQ96HQ2 116 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 ZFYVE19Q96K21 471 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 OLFM1Q99784 485 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 C1QTNF1Q9BXJ1 281 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 NMRAL1Q9HBL8 299 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 BPIFA1Q9NP55 256 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 ZNF358Q9NW07 568 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 OBP2AQ9NY56 170 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 GDE1Q9NZC3 331 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 KLHL14Q9P2G3 628 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 COPG2Q9UBF2 871 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 HECAQ9UBI9 543 aaPredicted RBP8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 SLC8A2Q9UPR5 921 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 ACOT9Q9Y305 439 aa8.07□□□□□ -1.12
PDZRN3-212ENST00000498048 LRP4O75096 1905 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 NPIPB15A6NHN6 443 aaPredicted RBP8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 H7C0S8 307 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 TRIM24O15164 1050 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 H2AFYO75367 372 aaKnown RBP8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 TULP3O75386 442 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 NDUFS3O75489 264 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 ZNF821O75541 412 aaPredicted RBP8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 KLHL2O95198 593 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 PRAMEF1O95521 474 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 S1PR4O95977 384 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 SERPINE1P05121 402 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 SRPRAP08240 638 aaKnown RBP8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 LTA4HP09960 611 aaKnown RBP8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 PRSS56P0CW18 603 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 FGF3P11487 239 aaPredicted RBP8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 COL6A2P12110 1019 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 BMP1P13497 986 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 ITGALP20701 1170 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 FDXRP22570 491 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 PSMA3P25788 255 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 NNMTP40261 264 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 TTPAP49638 278 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 PGGT1BP53609 377 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 ST8SIA6P61647 398 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 OVGP1Q12889 678 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 IFT88Q13099 833 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 CSHL1Q14406 222 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 PDGFRLQ15198 375 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 CARD16Q5EG05 197 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 TECRLQ5HYJ1 363 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 PSAPL1Q6NUJ1 521 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 KLC3Q6P597 504 aa8.06□□□□□ -1.12
PDZRN3-212ENST00000498048 FAM151BQ6UXP7 276 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms