RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 PARGQ86W56 976 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 SLC13A5Q86YT5 568 aaPredicted RBP11.25□□□□□ -0.61
ERCC8-208ENST00000497892 REXO1L1PQ8IX06 675 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 NUS1Q96E22 293 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 DTD2Q96FN9 168 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 IFT43Q96FT9 208 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 OXNAD1Q96HP4 312 aaPredicted RBP11.25□□□□□ -0.61
ERCC8-208ENST00000497892 FCRL5Q96RD9 977 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 GBA3Q9H227 469 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 USP29Q9HBJ7 922 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 RSPH14Q9UHP6 348 aa11.25□□□□□ -0.61
ERCC8-208ENST00000497892 R3HDM2Q9Y2K5 976 aaKnown RBP11.25□□□□□ -0.61
ERCC8-208ENST00000497892 SH3BP5O60239 455 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 PMPCBO75439 489 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 KCNK5O95279 499 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 NDST3O95803 873 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 PCCBP05166 539 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 CEACAM1P13688 526 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 NME1P15531 152 aaKnown RBP11.24□□□□□ -0.61
ERCC8-208ENST00000497892 ETV3P41162 512 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 GRK6P43250 576 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 NOVA1P51513 510 aaKnown RBP11.24□□□□□ -0.61
ERCC8-208ENST00000497892 STC1P52823 247 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 THOP1P52888 689 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 CDK18Q07002 472 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 INPP5AQ14642 412 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 SUZ12Q15022 739 aaKnown RBP11.24□□□□□ -0.61
ERCC8-208ENST00000497892 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 CRTC1Q6UUV9 634 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 MACC1Q6ZN28 852 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 KANSL1Q7Z3B3 1105 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 RAVER1Q8IY67 606 aaKnown RBP11.24□□□□□ -0.61
ERCC8-208ENST00000497892 DEFB124Q8NES8 71 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 BAHD1Q8TBE0 780 aaPredicted RBP11.24□□□□□ -0.61
ERCC8-208ENST00000497892 SAP25Q8TEE9 199 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 SPATA13Q96N96 652 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 GORASP1Q9BQQ3 440 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 FRMD8P1Q9BZ68 369 aaPredicted RBP11.24□□□□□ -0.61
ERCC8-208ENST00000497892 SLC32A1Q9H598 525 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 KCTD5Q9NXV2 234 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 UBP1Q9NZI7 540 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 FAM153AQ9UHL3 310 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 PCOLCE2Q9UKZ9 415 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 PCNX2A6NKB5 2137 aa11.24□□□□□ -0.61
ERCC8-208ENST00000497892 ARID1BQ8NFD5 2236 aaPredicted RBP11.23□□□□□ -0.61
ERCC8-208ENST00000497892 A0A0U1RQS6 177 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 C1orf232A0A0U1RR37 186 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 LOC285095A0A1B0GVY8 99 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 F5H423 210 aaPredicted RBP11.23□□□□□ -0.61
ERCC8-208ENST00000497892 LIASO43766 372 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 CBFA2T3O75081 653 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 EPOP01588 193 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 C1SP09871 688 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 ATXN1LP0C7T5 689 aaKnown RBP11.23□□□□□ -0.61
ERCC8-208ENST00000497892 WNT3AP56704 352 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 PTSQ03393 145 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 CCDC173Q0VFZ6 552 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 MPP3Q13368 585 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 PTK2BQ14289 1009 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 CDKN3Q16667 212 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 INAVAQ3KP66 663 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 ANKRD20A2Q5SQ80 823 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 LCE2AQ5TA79 106 aaPredicted RBP11.23□□□□□ -0.61
ERCC8-208ENST00000497892 ANKRD20A1Q5TYW2 823 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 ANKRD20A3Q5VUR7 823 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 DENND2CQ68D51 928 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 PSAPL1Q6NUJ1 521 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 Q6ZVL8 140 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 ERMP1Q7Z2K6 904 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 KDELC2Q7Z4H8 507 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 TECPR1Q7Z6L1 1165 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 GATAD2AQ86YP4 633 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 PLA2G15Q8NCC3 412 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 IPMKQ8NFU5 416 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 CCDC110Q8TBZ0 833 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 ATG4AQ8WYN0 398 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 CAMK1GQ96NX5 476 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 MLPHQ9BV36 600 aaPredicted RBP11.23□□□□□ -0.61
ERCC8-208ENST00000497892 BTBD3Q9Y2F9 522 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 JRKLQ9Y4A0 524 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 OR1A2Q9Y585 309 aa11.23□□□□□ -0.61
ERCC8-208ENST00000497892 TDRD6O60522 2096 aaKnown RBP11.23□□□□□ -0.61
ERCC8-208ENST00000497892 C5orf60A6NFR6 353 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 H3BM21 787 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 K7ESM1 405 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 GIPC1O14908 333 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 SDC3O75056 442 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 ANXA9O76027 345 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 CSF2P04141 144 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 ITGAVP06756 1048 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 CCNYL3P0C7X3 344 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 TSHRP16473 764 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 PSMB4P28070 264 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 HTR1BP28222 390 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 TEAD1P28347 426 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 TRIM23P36406 574 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 GDF10P55107 478 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 KIAA1024LP59773 190 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 DPTQ07507 201 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 EIF2B5Q13144 721 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms