RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 LSP1P33241 339 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 SPAM1P38567 509 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 NEK3P51956 506 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 STC1P52823 247 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 MPP1Q00013 466 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 PFKPQ01813 784 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 CACNG1Q06432 222 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 CCDC15Q0P6D6 951 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 USP10Q14694 798 aaKnown RBP12.17□□□□□ -0.46
HPS1-213ENST00000497527 TERF2Q15554 542 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 SMAD1Q15797 465 aaKnown RBP12.17□□□□□ -0.46
HPS1-213ENST00000497527 DBN1Q16643 649 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 AAK1Q2M2I8 961 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 PUS10Q3MIT2 529 aaKnown RBP12.17□□□□□ -0.46
HPS1-213ENST00000497527 GPR33Q49SQ1 333 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 FAM46CQ5VWP2 391 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 LYPLAL1Q5VWZ2 237 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 ERAP2Q6P179 960 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 KYAT3Q6YP21 454 aaKnown RBP12.17□□□□□ -0.46
HPS1-213ENST00000497527 SH2D5Q6ZV89 423 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 TAX1BP1Q86VP1 789 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 TRIM42Q8IWZ5 723 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 TTC8Q8TAM2 541 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 MDM1Q8TC05 714 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 TCP10LQ8TDR4 215 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 DENND1AQ8TEH3 1009 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 PBXIP1Q96AQ6 731 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 RPP25Q9BUL9 199 aaKnown RBP12.17□□□□□ -0.46
HPS1-213ENST00000497527 PHF7Q9BWX1 381 aaPredicted RBP12.17□□□□□ -0.46
HPS1-213ENST00000497527 CDH19Q9H159 772 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 CCDC68Q9H2F9 335 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 FBRSQ9HAH7 460 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 DYRK4Q9NR20 520 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 FKBPLQ9UIM3 349 aa12.17□□□□□ -0.46
HPS1-213ENST00000497527 MTO1Q9Y2Z2 717 aaKnown RBP12.17□□□□□ -0.46
HPS1-213ENST00000497527 A0A087X1B8 175 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 RGSL1A5PLK6 1076 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 C2CD4DB7Z1M9 353 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 KPNA3O00505 521 aaPredicted RBP12.16□□□□□ -0.46
HPS1-213ENST00000497527 BUD23O43709 281 aaKnown RBP12.16□□□□□ -0.46
HPS1-213ENST00000497527 NDUFS3O75489 264 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 S1PR4O95977 384 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 APOA4P06727 396 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 GLULP15104 373 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 ITGB7P26010 798 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 FOXN2P32314 431 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 RPA3P35244 121 aaPredicted RBP12.16□□□□□ -0.46
HPS1-213ENST00000497527 RAB10P61026 200 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 ELP6Q0PNE2 266 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 CDKN3Q16667 212 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 ZRANB3Q5FWF4 1079 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 LRRC66Q68CR7 880 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 SDE2Q6IQ49 451 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 LVRNQ6Q4G3 990 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 RAPH1Q70E73 1250 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 TRMT11Q7Z4G4 463 aaKnown RBP12.16□□□□□ -0.46
HPS1-213ENST00000497527 SNX20Q7Z614 316 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 GPATCH11Q8N954 259 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 ST13P5Q8NFI4 369 aaPredicted RBP12.16□□□□□ -0.46
HPS1-213ENST00000497527 MGARPQ8TDB4 240 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 DTX3LQ8TDB6 740 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 ATXN2LQ8WWM7 1075 aaKnown RBP12.16□□□□□ -0.46
HPS1-213ENST00000497527 HLA-CQ95604 372 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 ATXN7L3BQ96GX2 97 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 ELMO2Q96JJ3 720 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 MAGEB18Q96M61 343 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 FAM161BQ96MY7 647 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 PLEKHG4BQ96PX9 1271 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 KLF6Q99612 283 aaPredicted RBP12.16□□□□□ -0.46
HPS1-213ENST00000497527 NSRP1Q9H0G5 558 aaKnown RBP12.16□□□□□ -0.46
HPS1-213ENST00000497527 VPS11Q9H270 941 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 FBXO6Q9NRD1 293 aaPredicted RBP12.16□□□□□ -0.46
HPS1-213ENST00000497527 SLC39A10Q9ULF5 831 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 PLXNA2O75051 1894 aa12.16□□□□□ -0.46
HPS1-213ENST00000497527 MYO10Q9HD67 2058 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 A0A096LPK6 155 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 GLYATL1P3A0A0U1RQE8 302 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 NPIPB15A6NHN6 443 aaPredicted RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 C16orf96A6NNT2 1141 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 FOXO6A8MYZ6 492 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 SPECC1L-ADORA2AF8WAN1 911 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 PSMD11O00231 422 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 SOX1O00570 391 aaPredicted RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 RNASEH1O60930 286 aaKnown RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 HAUS5O94927 633 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 CLDN7O95471 211 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 ASMTLO95671 621 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 C2P06681 752 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 EPHX1P07099 455 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 FOSL2P15408 326 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 DRD1P21728 446 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 GABRB3P28472 473 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 CTHP32929 405 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 SLC26A3P40879 764 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 GALK1P51570 392 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 ITGA9Q13797 1035 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 ENPP2Q13822 863 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 PTPRCAPQ14761 206 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 SMAD2Q15796 467 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms