RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 CDKN3Q16667 212 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 HS1BP3Q53T59 392 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 RAET1GQ6H3X3 334 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 RFLNAQ6ZTI6 216 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 GLRX5Q86SX6 157 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 RAVER1Q8IY67 606 aaKnown RBP22.69■■□□□ 1.22
CHRD-217ENST00000496527 PHACTR4Q8IZ21 702 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 NRSN1Q8IZ57 195 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 PELI3Q8N2H9 469 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 IPMKQ8NFU5 416 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 SLC35B2Q8TB61 432 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 CCDC110Q8TBZ0 833 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 FUBP1Q96AE4 644 aaKnown RBP22.69■■□□□ 1.22
CHRD-217ENST00000496527 AP2M1Q96CW1 435 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 SRPK1Q96SB4 655 aaKnown RBP22.69■■□□□ 1.22
CHRD-217ENST00000496527 TLR10Q9BXR5 811 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 SLC13A1Q9BZW2 595 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 ABCG8Q9H221 673 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 MAGEE1Q9HCI5 957 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 PKD2L2Q9NZM6 624 aa22.69■■□□□ 1.22
CHRD-217ENST00000496527 LOC285095A0A1B0GVY8 99 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 PDE2AO00408 941 aaPredicted RBP22.68■■□□□ 1.22
CHRD-217ENST00000496527 TNFSF14O43557 240 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 ADRB1P08588 477 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 PIRTP0C851 137 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 KELP23276 732 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 DPTQ07507 201 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 ZNF765Q7L2R6 523 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 REXO1L1PQ8IX06 675 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 FAM71DQ8N9W8 422 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 MRGPRX2Q96LB1 330 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 FSD1LQ9BXM9 530 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 FRMD8P1Q9BZ68 369 aaPredicted RBP22.68■■□□□ 1.22
CHRD-217ENST00000496527 CAAP1Q9H8G2 361 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 ZFYVE1Q9HBF4 777 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 PHPT1Q9NRX4 125 aaPredicted RBP22.68■■□□□ 1.22
CHRD-217ENST00000496527 SPASTQ9UBP0 616 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 KLQ9UEF7 1012 aa22.68■■□□□ 1.22
CHRD-217ENST00000496527 APOBEC3BQ9UH17 382 aaKnown RBP22.68■■□□□ 1.22
CHRD-217ENST00000496527 C5orf60A6NFR6 353 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 FFAR2O15552 330 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 RASGRP1O95267 797 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 LDOC1O95751 146 aaPredicted RBP22.67■■□□□ 1.22
CHRD-217ENST00000496527 TEAD1P28347 426 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 GPR1P46091 355 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 SRP54P61011 504 aaKnown RBP22.67■■□□□ 1.22
CHRD-217ENST00000496527 LYSMD3Q7Z3D4 306 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 RD3Q7Z3Z2 195 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 NLRP8Q86W28 1048 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 HEATR4Q86WZ0 1026 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 HID1Q8IV36 788 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 RBFAQ8N0V3 343 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 SLC25A41Q8N5S1 370 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 ZNF548Q8NEK5 533 aaPredicted RBP22.67■■□□□ 1.22
CHRD-217ENST00000496527 LMX1AQ8TE12 382 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 SCAMP4Q969E2 229 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 TSACCQ96A04 125 aaPredicted RBP22.67■■□□□ 1.22
CHRD-217ENST00000496527 CNDP2Q96KP4 475 aaKnown RBP22.67■■□□□ 1.22
CHRD-217ENST00000496527 PPP1R2P1Q96PQ5 205 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 TMEM121Q9BTD3 319 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 GPR63Q9BZJ6 419 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 PNMA8BQ9ULN7 279 aaPredicted RBP22.67■■□□□ 1.22
CHRD-217ENST00000496527 SHOC2Q9UQ13 582 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 AAR2Q9Y312 384 aaKnown RBP22.67■■□□□ 1.22
CHRD-217ENST00000496527 ZNF711Q9Y462 761 aa22.67■■□□□ 1.22
CHRD-217ENST00000496527 TDRD6O60522 2096 aaKnown RBP22.66■■□□□ 1.22
CHRD-217ENST00000496527 RGSL1A5PLK6 1076 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 SCAMP1O15126 338 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 AQP9O43315 295 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 PYGLP06737 847 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 ALPPL2P10696 532 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 MYCLP1P12525 358 aaPredicted RBP22.66■■□□□ 1.22
CHRD-217ENST00000496527 HLA-DPA1P20036 260 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 PSMB4P28070 264 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 SPINT3P49223 89 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 HK3P52790 923 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 ALG11Q2TAA5 492 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 PRRT3Q5FWE3 981 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 SIRPB2Q5JXA9 342 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 ARHGEF18Q6ZSZ5 1173 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 OR56A4Q8NGH8 313 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 ATG4AQ8WYN0 398 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 RIOK2Q9BVS4 552 aaKnown RBP22.66■■□□□ 1.22
CHRD-217ENST00000496527 LGR4Q9BXB1 951 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 TEX101Q9BY14 249 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 TCEAL2Q9H3H9 227 aaPredicted RBP22.66■■□□□ 1.22
CHRD-217ENST00000496527 TRMT1Q9NXH9 659 aaKnown RBP22.66■■□□□ 1.22
CHRD-217ENST00000496527 APOBEC2Q9Y235 224 aaKnown RBP22.66■■□□□ 1.22
CHRD-217ENST00000496527 CSNK1G3Q9Y6M4 447 aa22.66■■□□□ 1.22
CHRD-217ENST00000496527 TMEM202A6NGA9 273 aa22.65■■□□□ 1.22
CHRD-217ENST00000496527 TNFRSF10CO14798 259 aa22.65■■□□□ 1.22
CHRD-217ENST00000496527 LIASO43766 372 aa22.65■■□□□ 1.22
CHRD-217ENST00000496527 TNFP01375 233 aa22.65■■□□□ 1.22
CHRD-217ENST00000496527 SLC4A1P02730 911 aa22.65■■□□□ 1.22
CHRD-217ENST00000496527 ATXN1LP0C7T5 689 aaKnown RBP22.65■■□□□ 1.22
CHRD-217ENST00000496527 FTH1P19P0C7X4 201 aa22.65■■□□□ 1.22
CHRD-217ENST00000496527 CTSEP14091 401 aa22.65■■□□□ 1.22
CHRD-217ENST00000496527 CDK3Q00526 305 aa22.65■■□□□ 1.22
CHRD-217ENST00000496527 SLC1A5Q15758 541 aa22.65■■□□□ 1.22
CHRD-217ENST00000496527 OR4C6Q8NH72 309 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms