RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 KCTD16Q68DU8 428 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 Q6ZVL8 140 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 TECPR1Q7Z6L1 1165 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 PELI3Q8N2H9 469 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 MRFAP1L1Q96HT8 127 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 LGR4Q9BXB1 951 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 FRMD8Q9BZ67 464 aaPredicted RBP15.7■□□□□ 0.1
HDAC4-213ENST00000496347 PCDH9Q9HC56 1237 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 SIRPGQ9P1W8 387 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 PCDHB1Q9Y5F3 818 aa15.7■□□□□ 0.1
HDAC4-213ENST00000496347 A0A0A6YYK5 440 aaPredicted RBP15.69■□□□□ 0.1
HDAC4-213ENST00000496347 GOLGA6CA6NDK9 693 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 GOLGA6BA6NDN3 693 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 DXOO77932 396 aaKnown RBP15.69■□□□□ 0.1
HDAC4-213ENST00000496347 GOLGA6DP0CG33 693 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 ACTN2P35609 894 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 STC1P52823 247 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 NIPAL4Q0D2K0 466 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 ZBTB17Q13105 803 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 IHHQ14623 411 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 SPA17Q15506 151 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 TCEA2Q15560 299 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 SLC14A2Q15849 920 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 TAZQ16635 292 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 KIF26BQ2KJY2 2108 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 TBC1D25Q3MII6 688 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 PERM1Q5SV97 790 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 C11orf63Q6NUN7 778 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 CRTC1Q6UUV9 634 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 ADAMTSL4Q6UY14 1074 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 NRSN1Q8IZ57 195 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 LSMEM2Q8N112 164 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 LPCAT1Q8NF37 534 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 KIAA1524Q8TCG1 905 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 AP2M1Q96CW1 435 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 CCDC3Q9BQI4 270 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 ADGRE3Q9BY15 652 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 CYP4F12Q9HCS2 524 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 MRPL40Q9NQ50 206 aaKnown RBP15.69■□□□□ 0.1
HDAC4-213ENST00000496347 GOLGA6AQ9NYA3 693 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 LHX6Q9UPM6 363 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 CHKBQ9Y259 395 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 SLC17A4Q9Y2C5 497 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 UNC13CQ8NB66 2214 aa15.69■□□□□ 0.1
HDAC4-213ENST00000496347 SCN8AQ9UQD0 1980 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 USP12O75317 370 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 SOD1P00441 154 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 PRLP01236 227 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 JCHAINP01591 159 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 IVLP07476 585 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 MMP2P08253 660 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 CYLC1P35663 651 aaPredicted RBP15.68■□□□□ 0.1
HDAC4-213ENST00000496347 CD86P42081 329 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 CDKN2BP42772 138 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 MAGEA1P43355 309 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 NR2C2P49116 596 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 GABREP78334 506 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 AP1B1Q10567 949 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 ILF3Q12906 894 aaKnown RBP eCLIP15.68■□□□□ 0.1
HDAC4-213ENST00000496347 SPIDRQ14159 915 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 TFDP2Q14188 446 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 CERCAMQ5T4B2 595 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 IGF2-ASQ6U949 168 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 NYAP1Q6ZVC0 841 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 BZW1Q7L1Q6 419 aaKnown RBP15.68■□□□□ 0.1
HDAC4-213ENST00000496347 TAF8Q7Z7C8 310 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 NLRP8Q86W28 1048 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 RFX6Q8HWS3 928 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.68■□□□□ 0.1
HDAC4-213ENST00000496347 GPR156Q8NFN8 814 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 CCDC74AQ96AQ1 378 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 PANX2Q96RD6 677 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 GSDMCQ9BYG8 508 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 TMEM168Q9H0V1 697 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 CDH19Q9H159 772 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 POLR1BQ9H9Y6 1135 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 CARS2Q9HA77 564 aaKnown RBP15.68■□□□□ 0.1
HDAC4-213ENST00000496347 TRNAU1APQ9NX07 287 aaKnown RBP15.68■□□□□ 0.1
HDAC4-213ENST00000496347 GULP1Q9UBP9 304 aa15.68■□□□□ 0.1
HDAC4-213ENST00000496347 ATRXP46100 2492 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 C1orf232A0A0U1RR37 186 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 D6RAR5 112 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 IPO7O95373 1038 aaKnown RBP15.67■□□□□ 0.1
HDAC4-213ENST00000496347 CEACAM5P06731 702 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 GLB1P16278 677 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 FECHP22830 423 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 NOP2P46087 812 aaKnown RBP15.67■□□□□ 0.1
HDAC4-213ENST00000496347 GPR1P46091 355 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 LSSP48449 732 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 ZNF75DP51815 510 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 PDX1P52945 283 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 SKOR1P84550 965 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 PTSQ03393 145 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 PEX6Q13608 980 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 PRKD1Q15139 912 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-213ENST00000496347 C14orf28Q4W4Y0 310 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 MFSD7Q6UXD7 560 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 KATNAL2Q8IYT4 538 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 CNTD1Q8N815 330 aa15.67■□□□□ 0.1
HDAC4-213ENST00000496347 GPBAR1Q8TDU6 330 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms