RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 ARHGAP6O43182 974 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 SOD1P00441 154 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 C1QTNF9P0C862 333 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 TSHRP16473 764 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 CA4P22748 312 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 NFKBIAP25963 317 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 PTPN7P35236 360 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 STC1P52823 247 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 KIAA1024LP59773 190 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 SRP54P61011 504 aaKnown RBP17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 COPS2P61201 443 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 DAB2P98082 770 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 CDKN3Q16667 212 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 BZW1Q7L1Q6 419 aaKnown RBP17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 LYSMD3Q7Z3D4 306 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 TRIM74Q86UV6 250 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 SYCE1Q8N0S2 351 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 OXNAD1Q96HP4 312 aaPredicted RBP17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 APOLD1Q96LR9 279 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 ABCG8Q9H221 673 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 WDR26Q9H7D7 661 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 NLGN3Q9NZ94 848 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 MOSPD1Q9UJG1 213 aa17.54■□□□□ 0.4
RHBDD3-207ENST00000496342 ZNF106Q9H2Y7 1883 aaKnown RBP17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 ANKRD66B4E2M5 251 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 CACNB4O00305 520 aaPredicted RBP17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 TOR1BO14657 336 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 RFPL3O75679 317 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 HTR1BP28222 390 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 TRIM23P36406 574 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 HK3P52790 923 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 EIF3EP60228 445 aaKnown RBP17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 KDELC1Q6UW63 502 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 PID1Q7Z2X4 250 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 NDUFAF2Q8N183 169 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 TXLNBQ8N3L3 684 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 CCDC112Q8NEF3 446 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 EID2BQ96D98 161 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 GORASP1Q9BQQ3 440 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 MLPHQ9BV36 600 aaPredicted RBP17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 TMEM121BQ9BXQ6 578 aaPredicted RBP17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 SLC13A1Q9BZW2 595 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 LZTFL1Q9NQ48 299 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 SPASTQ9UBP0 616 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 SHOC2Q9UQ13 582 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 R3HDM2Q9Y2K5 976 aaKnown RBP17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 SPO11Q9Y5K1 396 aa17.53■□□□□ 0.4
RHBDD3-207ENST00000496342 AKAP13Q12802 2813 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 HACD1B0YJ81 288 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 CASC3O15234 703 aaKnown RBP17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 RASGRP1O95267 797 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 TRIM16O95361 564 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 RBP3P10745 1247 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 ZNF30P17039 623 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 CKMT2P17540 419 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 CHRNA4P43681 627 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 RPL26P61254 145 aaKnown RBP17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 CDK3Q00526 305 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 CDK18Q07002 472 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 OLIG2Q13516 323 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 DOK6Q6PKX4 331 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 SFTPA2Q8IWL1 248 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 UBL4BQ8N7F7 174 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 OR56A4Q8NGH8 313 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 CCL4L1Q8NHW4 92 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 AP2M1Q96CW1 435 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 HES6Q96HZ4 224 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 WDR24Q96S15 920 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 LYSMD1Q96S90 227 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 RIOK2Q9BVS4 552 aaKnown RBP17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 RSPH14Q9UHP6 348 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 RPL26L1Q9UNX3 145 aaKnown RBP17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 NEUROG3Q9Y4Z2 214 aa17.52■□□□□ 0.4
RHBDD3-207ENST00000496342 MIF4GDA9UHW6 222 aaKnown RBP17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 AURKAO14965 403 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 INPP4BO15327 924 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 FUCA1P04066 466 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 ALPPL2P10696 532 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 MYCLP1P12525 358 aaPredicted RBP17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 CTSEP14091 401 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 GPR1P46091 355 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 MAP1BP46821 2468 aaKnown RBP17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 POLD2P49005 469 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 WNT3AP56704 352 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 XRCC4Q13426 336 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 ALS2CLQ60I27 953 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 SLC25A41Q8N5S1 370 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 IPMKQ8NFU5 416 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 BTN2A2Q8WVV5 523 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 GATA6Q92908 595 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 MRGPRX2Q96LB1 330 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 TEX101Q9BY14 249 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 TSGA10Q9BZW7 698 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 CYP4F12Q9HCS2 524 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 SIRPGQ9P1W8 387 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 EFR3BQ9Y2G0 817 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 ZNF711Q9Y462 761 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 CSNK1G3Q9Y6M4 447 aa17.51■□□□□ 0.39
RHBDD3-207ENST00000496342 PRSS38A1L453 326 aa17.5■□□□□ 0.39
RHBDD3-207ENST00000496342 NEMP2A6NFY4 417 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms