RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 BCL2L1Q07817 233 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 MSLNQ13421 630 aaPredicted RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 CSHL1Q14406 222 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 GALNT3Q14435 633 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 MAPRE2Q15555 327 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 LRRC26Q2I0M4 334 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 PPM1JQ5JR12 505 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 ARMC12Q5T9G4 340 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 HECTD2Q5U5R9 776 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 LYPLAL1Q5VWZ2 237 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 METTL21CQ5VZV1 264 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 ASRGL1Q7L266 308 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 SUGP1Q8IWZ8 645 aaKnown RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 PHTF2Q8N3S3 785 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 PGBD5Q8N414 524 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 FSTL5Q8N475 847 aaPredicted RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 DEFB123Q8N688 67 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.93□□□□□ -1.3
USP39-219ENST00000496047 ARL14EPQ8N8R7 260 aaPredicted RBP6.93□□□□□ -1.3
USP39-219ENST00000496047 KREMEN2Q8NCW0 462 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 STMN2Q93045 179 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 CMTM5Q96DZ9 223 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 MYO19Q96H55 970 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 CNDP1Q96KN2 507 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 ZNF778Q96MU6 729 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 C19orf43Q9BQ61 176 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 BTBD10Q9BSF8 475 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 TRMOQ9BU70 441 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 GPR63Q9BZJ6 419 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 DRC3Q9H069 523 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 POMKQ9H5K3 350 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 OXSMQ9NWU1 459 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 NDE1Q9NXR1 346 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 TAS2R13Q9NYV9 303 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 SLC2A6Q9UGQ3 507 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 CDYLQ9Y232 598 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 VWA7Q9Y334 891 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 SLC30A1Q9Y6M5 507 aa6.93□□□□□ -1.3
USP39-219ENST00000496047 SPTBN5Q9NRC6 3674 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 ZFC3H1O60293 1989 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 E2F8A0AVK6 867 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 PABPN1LA6NDY0 278 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 SOX1O00570 391 aaPredicted RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 SLC9A3R1O14745 358 aaPredicted RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 SLC22A2O15244 555 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 GRM6O15303 877 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 HDAC3O15379 428 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 TGM5O43548 720 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 LDB2O43679 373 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 MGRN1O60291 552 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 SRP72O76094 671 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 RHOBTB1O94844 696 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 PENKP01210 267 aaPredicted RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 SLC4A1P02730 911 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 S100BP04271 92 aaPredicted RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 ENO1P06733 434 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 CCDC166P0CW27 439 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 TPBGLP0DKB5 382 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 NCF2P19878 526 aaPredicted RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 CCND1P24385 295 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 ARNTP27540 789 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 SERPINA4P29622 427 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 ADSLP30566 484 aaPredicted RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 HOXA9P31269 272 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 HNRNPH1P31943 449 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 NNMTP40261 264 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 CSKP41240 450 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 ABCG1P45844 678 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 GLRBP48167 497 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 RPL14P50914 215 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 STC1P52823 247 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 ALDH18A1P54886 795 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 TAS2R39P59534 338 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 ATP6V0D1P61421 351 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 SNRPD1P62314 119 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 HTRA4P83105 476 aaPredicted RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 CYP4F8P98187 520 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 SATB1Q01826 763 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 SULT2A1Q06520 285 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 DLG2Q15700 870 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 SPRED3Q2MJR0 410 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 TYSND1Q2T9J0 566 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 ZRANB3Q5FWF4 1079 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 TECRLQ5HYJ1 363 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 WASHC2DQ5SRD0 308 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 PDE12Q6L8Q7 609 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 CXorf57Q6NSI4 855 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 CNSTQ6PJW8 725 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 CERS6Q6ZMG9 384 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 HTR3DQ70Z44 454 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 OTOP2Q7RTS6 562 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 EFL1Q7Z2Z2 1120 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 LONP2Q86WA8 852 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 TMPRSS6Q8IU80 811 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 FAM217AQ8IXS0 508 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 PLD6Q8N2A8 252 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 NKAPQ8N5F7 415 aaKnown RBP6.92□□□□□ -1.3
USP39-219ENST00000496047 TEX9Q8N6V9 391 aa6.92□□□□□ -1.3
USP39-219ENST00000496047 MAB21L3Q8N8X9 362 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms