RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TBC1D30Q9Y2I9 924 aa8.84□□□□□ -0.99
GARNL3-219ENST00000495172 HS3ST4Q9Y661 456 aa8.84□□□□□ -0.99
GARNL3-219ENST00000495172 A0A0U1RQS6 177 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 A0A1W2PQJ5 194 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 INSIG1O15503 277 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ZNHIT1O43257 154 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ZW10O43264 779 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ALOX12BO75342 701 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 CLDN14O95500 239 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 TRUB2O95900 331 aaKnown RBP8.83□□□□□ -1
GARNL3-219ENST00000495172 RPN1P04843 607 aaKnown RBP8.83□□□□□ -1
GARNL3-219ENST00000495172 CD19P15391 556 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 TYRP1P17643 537 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ACTR1BP42025 376 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 GCLMP48507 274 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 VAV2P52735 878 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 SLC8A3P57103 927 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ACTR1AP61163 376 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ILF3Q12906 894 aaKnown RBP eCLIP8.83□□□□□ -1
GARNL3-219ENST00000495172 MTM1Q13496 603 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 TAF5Q15542 800 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ARL6IP4Q66PJ3 421 aaKnown RBP8.83□□□□□ -1
GARNL3-219ENST00000495172 FAAH2Q6GMR7 532 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 XKRXQ6PP77 449 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 IGFL3Q6UXB1 125 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 GFRALQ6UXV0 394 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 RPTNQ6XPR3 784 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ZSCAN30Q86W11 494 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 CIARTQ8N365 385 aaPredicted RBP8.83□□□□□ -1
GARNL3-219ENST00000495172 PCDH20Q8N6Y1 951 aaKnown RBP8.83□□□□□ -1
GARNL3-219ENST00000495172 ATP6V0D2Q8N8Y2 350 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 DCAF4L2Q8NA75 395 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 SLC38A9Q8NBW4 561 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ACBD4Q8NC06 268 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ATL2Q8NHH9 583 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 TFAP2BQ92481 460 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 SEMA4DQ92854 862 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 MR1Q95460 341 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 TGM7Q96PF1 710 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 GPR87Q9BY21 358 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 GSDMCQ9BYG8 508 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 TKTL2Q9H0I9 626 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 ANLNQ9NQW6 1124 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 OLAHQ9NV23 265 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 OGFRQ9NZT2 677 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 TINAGQ9UJW2 476 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 SNX7Q9UNH6 387 aa8.83□□□□□ -1
GARNL3-219ENST00000495172 GOLGA6L3A6NEY3 463 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 A8MX80 341 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 PCDH17O14917 1159 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 FANCGO15287 622 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 DDX3YO15523 660 aaKnown RBP8.82□□□□□ -1
GARNL3-219ENST00000495172 THAP12O43422 761 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 CREB3O43889 395 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 UNC5CO95185 931 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 CEACAM5P06731 702 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 FGF5P12034 268 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 GM2AP17900 193 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 OTX2P32243 289 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 ADCY8P40145 1251 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 CA7P43166 264 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 OTUD4Q01804 1114 aaKnown RBP8.82□□□□□ -1
GARNL3-219ENST00000495172 GPS2Q13227 327 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 TMEM52BQ4KMG9 183 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.82□□□□□ -1
GARNL3-219ENST00000495172 DOK6Q6PKX4 331 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 CBARPQ8N350 705 aaPredicted RBP8.82□□□□□ -1
GARNL3-219ENST00000495172 ZNF507Q8TCN5 953 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 ADAMTS18Q8TE60 1221 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 NINJ1Q92982 152 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 SGSM3Q96HU1 749 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 C9orf72Q96LT7 481 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 NT5C1BQ96P26 610 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 TAAR6Q96RI8 345 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 ZSWIM1Q9BR11 485 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 TRIM56Q9BRZ2 755 aaKnown RBP8.82□□□□□ -1
GARNL3-219ENST00000495172 MLPHQ9BV36 600 aaPredicted RBP8.82□□□□□ -1
GARNL3-219ENST00000495172 KRTAP3-3Q9BYR6 98 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 KRTAP3-2Q9BYR7 98 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 PCDH12Q9NPG4 1184 aa8.82□□□□□ -1
GARNL3-219ENST00000495172 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.82□□□□□ -1
GARNL3-219ENST00000495172 RASA4BC9J798 803 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 I6L893 689 aaPredicted RBP8.81□□□□□ -1
GARNL3-219ENST00000495172 RASA4O43374 803 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 PROM1O43490 865 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 CLDN11O75508 207 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 REC8O95072 547 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 SIX3O95343 332 aaPredicted RBP8.81□□□□□ -1
GARNL3-219ENST00000495172 PIGNO95427 931 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 IGLV3-25P01717 112 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 FOLR1P15328 257 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 CASP1P29466 404 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 ACVRL1P37023 503 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 PPP1CAP62136 330 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 PPP3CAQ08209 521 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 MYBPC3Q14896 1274 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 C3AR1Q16581 482 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 MYLK3Q32MK0 819 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 EFHC1Q5JVL4 640 aa8.81□□□□□ -1
GARNL3-219ENST00000495172 TTC39BQ5VTQ0 682 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms