RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 APOL1O14791 398 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 SOD1P00441 154 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 TRBC1P01850 177 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 CEACAM5P06731 702 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 GP1BAP07359 652 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 MYCLP1P12525 358 aaPredicted RBP10.6□□□□□ -0.71
NELFE-213ENST00000494956 PECAM1P16284 738 aaPredicted RBP10.6□□□□□ -0.71
NELFE-213ENST00000494956 AK4P27144 223 aaPredicted RBP10.6□□□□□ -0.71
NELFE-213ENST00000494956 EIF2S3P41091 472 aaKnown RBP10.6□□□□□ -0.71
NELFE-213ENST00000494956 ARHGAP25P42331 645 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 MAGEA1P43355 309 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 BLKP51451 505 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 EPHB1P54762 984 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 SKOR1P84550 965 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 CDK3Q00526 305 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 PPIDQ08752 370 aaKnown RBP10.6□□□□□ -0.71
NELFE-213ENST00000494956 AP1B1Q10567 949 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 RTP5Q14D33 572 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 ISXQ2M1V0 245 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 RALGPS1Q5JS13 557 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 KAZNQ674X7 775 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 SLC9A4Q6AI14 798 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 RAET1GQ6H3X3 334 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 USP45Q70EL2 814 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 NRROSQ86YC3 692 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 LRRC49Q8IUZ0 686 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 RHOT2Q8IXI1 618 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 FSTL5Q8N475 847 aaPredicted RBP10.6□□□□□ -0.71
NELFE-213ENST00000494956 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.6□□□□□ -0.71
NELFE-213ENST00000494956 ATXN7L3BQ96GX2 97 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 TBATAQ96M53 351 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 TEX101Q9BY14 249 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 ABCG8Q9H221 673 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 CARS2Q9HA77 564 aaKnown RBP10.6□□□□□ -0.71
NELFE-213ENST00000494956 TMEM98Q9Y2Y6 226 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 PPIL1Q9Y3C6 166 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 ENTPD2Q9Y5L3 495 aa10.6□□□□□ -0.71
NELFE-213ENST00000494956 CAPN8A6NHC0 703 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 SOWAHDA6NJG2 315 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 B4DGG1 531 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 F5H423 210 aaPredicted RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 INPP4BO15327 924 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 SPOPO43791 374 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 NOBOXO60393 691 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 PIRTP0C851 137 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 CDKN2BP42772 138 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 GNPDA1P46926 289 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 ZNF75DP51815 510 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 PDX1P52945 283 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 MAZP56270 477 aaKnown RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 GABREP78334 506 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 CCL7P80098 99 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 GALNT3Q14435 633 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 QPCTQ16769 361 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 C3orf38Q5JPI3 329 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 FOXR1Q6PIV2 292 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 B3GNT8Q7Z7M8 397 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 GKN2Q86XP6 184 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 RHOT1Q8IXI2 618 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 SDR16C5Q8N3Y7 309 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 ARL10Q8N8L6 244 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 Q8N9G6 341 aaPredicted RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 FAM46DQ8NEK8 389 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 GPR156Q8NFN8 814 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 PATE1Q8WXA2 126 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 HAUS1Q96CS2 278 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 AP2M1Q96CW1 435 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 NAF1Q96HR8 494 aaKnown RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 AGAP3Q96P47 875 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 DEPDC7Q96QD5 511 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 WDR24Q96S15 920 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 MAK16Q9BXY0 300 aaKnown RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 FRMD8Q9BZ67 464 aaPredicted RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 USP29Q9HBJ7 922 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 PCDH9Q9HC56 1237 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 PHPT1Q9NRX4 125 aaPredicted RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 SPATS2LQ9NUQ6 558 aaKnown RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 ATXN7L1Q9ULK2 861 aaPredicted RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 SUFUQ9UMX1 484 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 SATB2Q9UPW6 733 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 PCDHA13Q9Y5I0 950 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 PCYT1BQ9Y5K3 369 aaPredicted RBP10.59□□□□□ -0.71
NELFE-213ENST00000494956 ALG6Q9Y672 507 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 DGKBQ9Y6T7 804 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 UNC13CQ8NB66 2214 aa10.59□□□□□ -0.71
NELFE-213ENST00000494956 DSPP15924 2871 aaKnown RBP10.58□□□□□ -0.72
NELFE-213ENST00000494956 ANKRD11Q6UB99 2663 aaPredicted RBP10.58□□□□□ -0.72
NELFE-213ENST00000494956 A0A1W2PQ67 120 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 A0A1W2PQM1 296 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 TNFRSF10CO14798 259 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 MT-CYBP00156 380 aaPredicted RBP10.58□□□□□ -0.72
NELFE-213ENST00000494956 MX2P20592 715 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 GPR1P46091 355 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 STC1P52823 247 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 IFI35P80217 286 aaPredicted RBP10.58□□□□□ -0.72
NELFE-213ENST00000494956 CCDC173Q0VFZ6 552 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 PCSK7Q16549 785 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 MARK2Q7KZI7 788 aaKnown RBP10.58□□□□□ -0.72
NELFE-213ENST00000494956 CACTIN-AS1Q8N1I8 211 aa10.58□□□□□ -0.72
NELFE-213ENST00000494956 ATL2Q8NHH9 583 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms