RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 NFKB2Q00653 900 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 SLC34A1Q06495 639 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 CUL3Q13618 768 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 KIRREL3Q8IZU9 778 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 ARL14EPQ8N8R7 260 aaPredicted RBP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 ADAMTS19Q8TE59 1207 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 PTERQ96BW5 349 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 TMA16Q96EY4 203 aaKnown RBP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 RSRC1Q96IZ7 334 aaKnown RBP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 PCDH10Q9P2E7 1040 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 MTF2Q9Y483 593 aaPredicted RBP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 GFRA2O00451 464 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 CCNT2O60583 730 aaKnown RBP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 RPSAP08865 295 aaKnown RBP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 MZF1P28698 734 aaPredicted RBP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 BTKQ06187 659 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 ZRSR2Q15696 482 aaKnown RBP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 TXNDC8Q6A555 127 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 NCEH1Q6PIU2 408 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 RP9Q8TA86 221 aaKnown RBP17.17■□□□□ 0.34
GABBR1-220ENST00000494877 LPGAT1Q92604 370 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 MIEF2Q96C03 454 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 L3HYPDHQ96EM0 354 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 IL21Q9HBE4 155 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 VPS28Q9UK41 221 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 OR51B4Q9Y5P0 310 aa17.17■□□□□ 0.34
GABBR1-220ENST00000494877 SDHDO14521 159 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 TEX28O15482 410 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 SMIM24O75264 130 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 TBX10O75333 385 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 LUC7L3O95232 432 aaKnown RBP17.16■□□□□ 0.34
GABBR1-220ENST00000494877 PRSS56P0CW18 603 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 GJA8P48165 433 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 PDAP1Q13442 181 aaKnown RBP17.16■□□□□ 0.34
GABBR1-220ENST00000494877 PGM2L1Q6PCE3 622 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 Q6ZNB5 142 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 CUZD1Q86UP6 607 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 GPR65Q8IYL9 337 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 DEFB107AQ8IZN7 70 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 CEP70Q8NHQ1 597 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 GSTO2Q9H4Y5 243 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 POLR3BQ9NW08 1133 aaPredicted RBP17.16■□□□□ 0.34
GABBR1-220ENST00000494877 CPQQ9Y646 472 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 KIAA0100Q14667 2235 aaKnown RBP17.16■□□□□ 0.34
GABBR1-220ENST00000494877 UBA6A0AVT1 1052 aaPredicted RBP17.16■□□□□ 0.34
GABBR1-220ENST00000494877 SCAMP3O14828 347 aaKnown RBP17.16■□□□□ 0.34
GABBR1-220ENST00000494877 NDUFS3O75489 264 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 CDC25CP30307 473 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 ZXDBP98169 803 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 TRAF2Q12933 501 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 PEX6Q13608 980 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 ZNF678Q5SXM1 525 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 TMEM198Q66K66 360 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 MYLK4Q86YV6 388 aaPredicted RBP17.16■□□□□ 0.34
GABBR1-220ENST00000494877 RHEBL1Q8TAI7 183 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 ARMC5Q96C12 935 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 SMIM14Q96QK8 99 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 ZBED2Q9BTP6 218 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 CCDC68Q9H2F9 335 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 SYTL2Q9HCH5 934 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 TAS2R13Q9NYV9 303 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 LHX3Q9UBR4 397 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 CDH22Q9UJ99 828 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 VPS9D1Q9Y2B5 631 aa17.16■□□□□ 0.34
GABBR1-220ENST00000494877 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
GABBR1-220ENST00000494877 EFCAB14O75071 495 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 PPM1AP35813 382 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 SESN3P58005 492 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 WDR5P61964 334 aaKnown RBP17.15■□□□□ 0.34
GABBR1-220ENST00000494877 HERVK_113P63132 956 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 CDH18Q13634 790 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 FAM217AQ8IXS0 508 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 DTX3LQ8TDB6 740 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 ZNF570Q96NI8 536 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 CATSPER2Q96P56 530 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 ERVK-6Q9BXR3 956 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 TFB2MQ9H5Q4 396 aaKnown RBP17.15■□□□□ 0.34
GABBR1-220ENST00000494877 C11orf49Q9H6J7 331 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 HACD3Q9P035 362 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 G3BP2Q9UN86 482 aaKnown RBP17.15■□□□□ 0.34
GABBR1-220ENST00000494877 ASB3Q9Y575 518 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 LILRB3O75022 631 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 RHOBTB1O94844 696 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 FMO4P31512 558 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 VHLP40337 213 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 ABL2P42684 1182 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 CYLC2Q14093 348 aaPredicted RBP17.15■□□□□ 0.34
GABBR1-220ENST00000494877 HERC3Q15034 1050 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 LRRC26Q2I0M4 334 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 SNX32Q86XE0 403 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 RYBPQ8N488 228 aaPredicted RBP17.15■□□□□ 0.34
GABBR1-220ENST00000494877 MEAF6Q9HAF1 191 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 ZBTB26Q9HCK0 441 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 MRGBPQ9NV56 204 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 VPS51Q9UID3 782 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 OBSL1O75147 1896 aa17.15■□□□□ 0.34
GABBR1-220ENST00000494877 PFDN6O15212 129 aa17.14■□□□□ 0.33
GABBR1-220ENST00000494877 STX7O15400 261 aaKnown RBP17.14■□□□□ 0.33
GABBR1-220ENST00000494877 SRP72O76094 671 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms