RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PHF19Q5T6S3 580 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 MARC1Q5VT66 337 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 TMPRSS9Q7Z410 1059 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 ZNF438Q7Z4V0 828 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 HSD11B1LQ7Z5J1 315 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 PIM3Q86V86 326 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 ZDHHC1Q8WTX9 485 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 TEKT4Q8WW24 435 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 MCCC1Q96RQ3 725 aaPredicted RBP23.21■■□□□ 1.31
COL27A1-208ENST00000494780 B3GNT4Q9C0J1 378 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 TAAR2Q9P1P5 351 aa23.21■■□□□ 1.31
COL27A1-208ENST00000494780 FLNBO75369 2602 aaKnown RBP23.21■■□□□ 1.31
COL27A1-208ENST00000494780 ARHGEF17Q96PE2 2063 aaPredicted RBP23.2■■□□□ 1.3
COL27A1-208ENST00000494780 PRAMEF33A0A0G2JMD5 474 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 RHPN2P1A8MT19 583 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 B4GAT1O43505 415 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 PRAMEF10O60809 474 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 FUCA1P04066 466 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 ETV5P41161 510 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 GNPDA1P46926 289 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 MAZP56270 477 aaKnown RBP23.2■■□□□ 1.3
COL27A1-208ENST00000494780 MAXP61244 160 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 PEX6Q13608 980 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 ARMC12Q5T9G4 340 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 RAET1GQ6H3X3 334 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 USP53Q70EK8 1073 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 USP45Q70EL2 814 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 SGF29Q96ES7 293 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 NAP1L5Q96NT1 182 aaPredicted RBP23.2■■□□□ 1.3
COL27A1-208ENST00000494780 SEMA6CQ9H3T2 930 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 SUDS3Q9H7L9 328 aaPredicted RBP23.2■■□□□ 1.3
COL27A1-208ENST00000494780 PCDH18Q9HCL0 1135 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 AKAP7Q9P0M2 348 aaPredicted RBP23.2■■□□□ 1.3
COL27A1-208ENST00000494780 SUFUQ9UMX1 484 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 SLC17A4Q9Y2C5 497 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 PPIL1Q9Y3C6 166 aa23.2■■□□□ 1.3
COL27A1-208ENST00000494780 SETXQ7Z333 2677 aaKnown RBP23.19■■□□□ 1.3
COL27A1-208ENST00000494780 NPIPB15A6NHN6 443 aaPredicted RBP23.19■■□□□ 1.3
COL27A1-208ENST00000494780 IVLP07476 585 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 MAPK10P53779 464 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 OR1D5P58170 312 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 DPTQ07507 201 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 FIGNQ5HY92 759 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 XKR5Q6UX68 686 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 Q6ZVL8 140 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 LRRC49Q8IUZ0 686 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 NIPA2Q8N8Q9 360 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 USP7Q93009 1102 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 TMEM63CQ9P1W3 806 aa23.19■■□□□ 1.3
COL27A1-208ENST00000494780 GOLGA6CA6NDK9 693 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 GOLGA6BA6NDN3 693 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 AGRPO00253 132 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 ECEL1O95672 775 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 GOLGA6DP0CG33 693 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 KRT10P13645 584 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 AK4P27144 223 aaPredicted RBP23.18■■□□□ 1.3
COL27A1-208ENST00000494780 CD82P27701 267 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 ALDH4A1P30038 563 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 C16orf72Q14CZ0 275 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 AMZ1Q400G9 498 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 TXNRD3NBQ6F5E7 133 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 TECPR1Q7Z6L1 1165 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 TSPAN33Q86UF1 283 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 NDUFAF2Q8N183 169 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 PIH1D2Q8WWB5 315 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 RDH14Q9HBH5 336 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 GOLGA6AQ9NYA3 693 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 FOXJ2Q9P0K8 574 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 PCDHB11Q9Y5F2 797 aa23.18■■□□□ 1.3
COL27A1-208ENST00000494780 HGSO14964 777 aaPredicted RBP23.17■■□□□ 1.3
COL27A1-208ENST00000494780 GPR3P46089 330 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 CTBSQ01459 385 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 SLC25A11Q02978 314 aaKnown RBP23.17■■□□□ 1.3
COL27A1-208ENST00000494780 BIRC2Q13490 618 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 TDRD12Q587J7 1177 aaKnown RBP23.17■■□□□ 1.3
COL27A1-208ENST00000494780 MANEAQ5SRI9 462 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 TMEM164Q5U3C3 297 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 SLC30A9Q6PML9 568 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 ZFAND4Q86XD8 727 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 DTX1Q86Y01 620 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 TEX26Q8N6G2 289 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 PTCD2Q8WV60 388 aaKnown RBP23.17■■□□□ 1.3
COL27A1-208ENST00000494780 SCARF2Q96GP6 870 aaPredicted RBP23.17■■□□□ 1.3
COL27A1-208ENST00000494780 NT5MQ9NPB1 228 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 RCOR3Q9P2K3 495 aaPredicted RBP23.17■■□□□ 1.3
COL27A1-208ENST00000494780 IP6K2Q9UHH9 426 aa23.17■■□□□ 1.3
COL27A1-208ENST00000494780 BZW2Q9Y6E2 419 aaKnown RBP23.17■■□□□ 1.3
COL27A1-208ENST00000494780 PIEZO2Q9H5I5 2752 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 C9orf172C9J069 976 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 FZD6O60353 706 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 ITGB2P05107 769 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 CTPS1P17812 591 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 ADCY8P40145 1251 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 GPR1P46091 355 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 POLD2P49005 469 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 ZNF165P49910 485 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 SRSF6Q13247 344 aaKnown RBP23.16■■□□□ 1.3
COL27A1-208ENST00000494780 NR1I3Q14994 352 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 PTPRRQ15256 657 aa23.16■■□□□ 1.3
COL27A1-208ENST00000494780 HGSNATQ68CP4 663 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms