RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 IGLV3-16A0A075B6K0 115 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 A0A087X1B8 175 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 RGSL1A5PLK6 1076 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 OR51F1A6NGY5 319 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 PRRT4C9JH25 899 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 TBX10O75333 385 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 TOP3BO95985 862 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 ATP5BP06576 529 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 APOA4P06727 396 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 CTSLP07711 333 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 PIRTP0C851 137 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 FGF3P11487 239 aaPredicted RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 HNRNPLP14866 589 aaKnown RBP eCLIP6.78□□□□□ -1.32
MSH5-217ENST00000494458 ARSAP15289 507 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 STMN1P16949 149 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 PSMC3P17980 439 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 POLR2EP19388 210 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 RPS3P23396 243 aaKnown RBP eCLIP6.78□□□□□ -1.32
MSH5-217ENST00000494458 GRK2P25098 689 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 MTHFRP42898 656 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 SLC6A11P48066 632 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 CCNHP51946 323 aaPredicted RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 PRKAA2P54646 552 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 DNAJB13P59910 316 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 POLR2LP62875 67 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 PRAMEP78395 509 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 PTSQ03393 145 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 RAD51Q06609 339 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 DLX2Q07687 328 aaPredicted RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 MESP2Q0VG99 397 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 DLG1Q12959 904 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 RUNX3Q13761 415 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 SEPT6Q14141 434 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 USP10Q14694 798 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 PCLAFQ15004 111 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 PTPRRQ15256 657 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 TSNAXIP1Q2TAA8 658 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 GPR33Q49SQ1 333 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 HSF5Q4G112 596 aaPredicted RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 SPDYAQ5MJ70 313 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 RBM20Q5T481 1227 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 RNF187Q5TA31 235 aaPredicted RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 HECTD2Q5U5R9 776 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 GKAP1Q5VSY0 366 aaPredicted RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 ZDHHC20Q5W0Z9 365 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 TRIM68Q6AZZ1 485 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 FAM45BPQ6NSW5 357 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 BRAT1Q6PJG6 821 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 CRTC1Q6UUV9 634 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 TMEM207Q6UWW9 146 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 CERS6Q6ZMG9 384 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 THSD4Q6ZMP0 1018 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 OTOAQ7RTW8 1153 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 PTAR1Q7Z6K3 402 aaPredicted RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 CPLX4Q7Z7G2 160 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 SDCCAG8Q86SQ7 713 aaPredicted RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 NLRP8Q86W28 1048 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 RNF135Q8IUD6 432 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 PIANPQ8IYJ0 282 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 SMRP1Q8NCR6 262 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 TMIEQ8NEW7 156 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 LPCAT1Q8NF37 534 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 GDAP1Q8TB36 358 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 FAM45AQ8TCE6 357 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 MGARPQ8TDB4 240 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 BHMTQ93088 406 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 PDLIM5Q96HC4 596 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 MYADMQ96S97 322 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 HEPHQ9BQS7 1158 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 AARSD1Q9BTE6 412 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 OSBPL1AQ9BXW6 950 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 TM6SF2Q9BZW4 377 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 BRD9Q9H8M2 597 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 CAB39LQ9H9S4 337 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 KCNK13Q9HB14 408 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 ZFYVE1Q9HBF4 777 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 MLXIPLQ9NP71 852 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 SLCO1B3Q9NPD5 702 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 IL26Q9NPH9 171 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 CATSPERZQ9NTU4 200 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 FGFR1OP2Q9NVK5 253 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 ZNF358Q9NW07 568 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 OXSMQ9NWU1 459 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 THG1LQ9NWX6 298 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 KLHL42Q9P2K6 505 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 SLC39A10Q9ULF5 831 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 PPM1HQ9ULR3 514 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 MTCH2Q9Y6C9 303 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 COMMD10Q9Y6G5 202 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 OAS3Q9Y6K5 1087 aaKnown RBP6.78□□□□□ -1.32
MSH5-217ENST00000494458 MYOFQ9NZM1 2061 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 COL4A3Q01955 1670 aa6.77□□□□□ -1.32
MSH5-217ENST00000494458 MUC22E2RYF6 1773 aaPredicted RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 TTC34A8MYJ7 566 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 EBAG9O00559 213 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 NPC1O15118 1278 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 STX7O15400 261 aaKnown RBP6.77□□□□□ -1.33
MSH5-217ENST00000494458 CSPG5O95196 566 aa6.77□□□□□ -1.33
MSH5-217ENST00000494458 PIGNO95427 931 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms