RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 FRYLO94915 3013 aa13.53□□□□□ -0.24
COL1A1-208ENST00000494334 K7ESM1 405 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 AURKAO14965 403 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 FGF1P05230 155 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 ZSCAN5DPP0CG00 497 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 CD59P13987 128 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 SDHBP21912 280 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 ACTN2P35609 894 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 RXRGP48443 463 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 SPINT3P49223 89 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 CCT8P50990 548 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 IL9RQ01113 521 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 DPTQ07507 201 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 BNIP3Q12983 259 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 SLC14A1Q13336 389 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 FZD2Q14332 565 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 DBX2Q6ZNG2 339 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 NLRP8Q86W28 1048 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 NRSN1Q8IZ57 195 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 OXR1Q8N573 874 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 CCDC89Q8N998 374 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 MAGOHBQ96A72 148 aaKnown RBP13.52□□□□□ -0.25
COL1A1-208ENST00000494334 AP2M1Q96CW1 435 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 SRPK1Q96SB4 655 aaKnown RBP13.52□□□□□ -0.25
COL1A1-208ENST00000494334 RTKNQ9BST9 563 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 GPR63Q9BZJ6 419 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 CAAP1Q9H8G2 361 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 ETNK1Q9HBU6 452 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 PKD2L2Q9NZM6 624 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 SAR1BQ9Y6B6 198 aa13.52□□□□□ -0.25
COL1A1-208ENST00000494334 ZNF292O60281 2723 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 CTAGE9A4FU28 777 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 RGSL1A5PLK6 1076 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 GOLGA6CA6NDK9 693 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 GOLGA6BA6NDN3 693 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 USP12O75317 370 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 GOLGA6DP0CG33 693 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 TSHRP16473 764 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 RPL22P35268 128 aaKnown RBP13.51□□□□□ -0.25
COL1A1-208ENST00000494334 FDFT1P37268 417 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 ARRB1P49407 418 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-208ENST00000494334 THOP1P52888 689 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 EIF2B5Q13144 721 aaKnown RBP13.51□□□□□ -0.25
COL1A1-208ENST00000494334 MSLNQ13421 630 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-208ENST00000494334 PTK2BQ14289 1009 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 CYP1B1Q16678 543 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 KCTD19Q17RG1 926 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-208ENST00000494334 ZNF542PQ5EBM4 170 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 RAET1GQ6H3X3 334 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 DENND5AQ6IQ26 1287 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 TTC27Q6P3X3 843 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 ZNF765Q7L2R6 523 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 PARGQ86W56 976 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
COL1A1-208ENST00000494334 ATL2Q8NHH9 583 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 BLOC1S5Q8TDH9 187 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 SAP25Q8TEE9 199 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 FUBP1Q96AE4 644 aaKnown RBP13.51□□□□□ -0.25
COL1A1-208ENST00000494334 AGAP2Q99490 1192 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 TBL1YQ9BQ87 522 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 LGR4Q9BXB1 951 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 TRABDQ9H4I3 376 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 LRRC40Q9H9A6 602 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 ARNT2Q9HBZ2 717 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 GOLGA6AQ9NYA3 693 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 PAK5Q9P286 719 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 KLF15Q9UIH9 416 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 PNMA8BQ9ULN7 279 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-208ENST00000494334 PCDHGB2Q9Y5G2 931 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 LRRK1Q38SD2 2015 aa13.51□□□□□ -0.25
COL1A1-208ENST00000494334 YKT6O15498 198 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 PSMD3O43242 534 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 PCDHGA12O60330 932 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 AP2A1O95782 977 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 SOD1P00441 154 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 CSF2P04141 144 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 HOXC4P09017 264 aaPredicted RBP13.5□□□□□ -0.25
COL1A1-208ENST00000494334 TEAD1P28347 426 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 EPHA8P29322 1005 aaPredicted RBP13.5□□□□□ -0.25
COL1A1-208ENST00000494334 HMGCLP35914 325 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 COILP38432 576 aaPredicted RBP13.5□□□□□ -0.25
COL1A1-208ENST00000494334 GPR1P46091 355 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 ID4P47928 161 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
COL1A1-208ENST00000494334 PUM1Q14671 1186 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL1A1-208ENST00000494334 NFATC4Q14934 902 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 SUZ12Q15022 739 aaKnown RBP13.5□□□□□ -0.25
COL1A1-208ENST00000494334 ENPP7Q6UWV6 458 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 MACC1Q6ZN28 852 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 NYAP1Q6ZVC0 841 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 GLT6D1Q7Z4J2 308 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 GATAD2AQ86YP4 633 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 CREG2Q8IUH2 290 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 TTC30BQ8N4P2 665 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 GPR26Q8NDV2 337 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 LRRC45Q96CN5 670 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 RIOK2Q9BVS4 552 aaKnown RBP13.5□□□□□ -0.25
COL1A1-208ENST00000494334 TEX101Q9BY14 249 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 FAM83DQ9H4H8 585 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms