RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 EPHB2P29323 1055 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 GNPDA1P46926 289 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 HDAC4P56524 1084 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 CTBSQ01459 385 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 ATP1A1-AS1Q5TC04 95 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 C16orf46Q6P387 395 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 EFCAB3Q8N7B9 438 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 OR10G6Q8NH81 332 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 RXFP2Q8WXD0 754 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 NUS1Q96E22 293 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 MAGEB5Q9BZ81 275 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 SLC17A4Q9Y2C5 497 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 PCDHB3Q9Y5E6 796 aa14.22□□□□□ -0.13
PRPF40A-211ENST00000493468 PRAMEF11O60813 436 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 RFPL1O75677 317 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 ADCY8P40145 1251 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 PMS2P54278 862 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 CDK3Q00526 305 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 ACOX1Q15067 660 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 SRLQ86TD4 932 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 SCARF2Q96GP6 870 aaPredicted RBP14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 AHCYL2Q96HN2 611 aaKnown RBP14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 CTRCQ99895 268 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 ZMYND15Q9H091 742 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 CATSPERBQ9H7T0 1116 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 POLHQ9Y253 713 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 RPS6KL1Q9Y6S9 549 aa14.21□□□□□ -0.13
PRPF40A-211ENST00000493468 PRRC2CQ9Y520 2896 aaKnown RBP14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 TRAFD1O14545 582 aaPredicted RBP14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 FGF10O15520 208 aaPredicted RBP14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 RECKO95980 971 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 ACTR1BP42025 376 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 NOP2P46087 812 aaKnown RBP14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 RGRP47804 291 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 ACTR1AP61163 376 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 BCL2L1Q07817 233 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 TAF3Q5VWG9 929 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 NAA35Q5VZE5 725 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 DPY19L2P1Q6NXN4 242 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 SLFN11Q7Z7L1 901 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 TICAM1Q8IUC6 712 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 CPT1CQ8TCG5 803 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 GPT2Q8TD30 523 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 FAM172AQ8WUF8 416 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 CPA5Q8WXQ8 436 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 LRRC19Q9H756 370 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 SUDS3Q9H7L9 328 aaPredicted RBP14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 APMAPQ9HDC9 416 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 DONSONQ9NYP3 566 aa14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 MRPS18BQ9Y676 258 aaKnown RBP14.2□□□□□ -0.14
PRPF40A-211ENST00000493468 TTLL8A6PVC2 850 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 POLR1CO15160 346 aaPredicted RBP14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 SEMA7AO75326 666 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 RNF224P0DH78 156 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 MMP8P22894 467 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 F8A1P23610 371 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 HTR7P34969 479 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 NDST2P52849 883 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 NSUN2Q08J23 767 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 NOP9Q86U38 636 aaKnown RBP14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 APLFQ8IW19 511 aaPredicted RBP14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 PYROXD2Q8N2H3 581 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 SFRP1Q8N474 314 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 TSEN2Q8NCE0 465 aaKnown RBP14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 JOSD2Q8TAC2 188 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 SLC37A2Q8TED4 501 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 DTD2Q96FN9 168 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 OR2M4Q96R27 311 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 SLC38A3Q99624 504 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 SIDT1Q9NXL6 827 aaKnown RBP14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 B4GALT6Q9UBX8 382 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 RWDD2AQ9UIY3 292 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 TLK1Q9UKI8 766 aa14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 TNRC6AQ8NDV7 1962 aaKnown RBP14.19□□□□□ -0.14
PRPF40A-211ENST00000493468 A0A1W2PQ67 120 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 J3KR12 359 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 PSMD11O00231 422 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 MMEP08473 750 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 ANKRD34CP0C6C1 535 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 DLSTP36957 453 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 EPHA4P54764 986 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 AIF1P55008 147 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 GSCP56915 257 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 AP1S1P61966 158 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 LRP8Q14114 963 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 CNGA3Q16281 694 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 MAMDC2Q7Z304 686 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 ZNF677Q86XU0 584 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 CBARPQ8N350 705 aaPredicted RBP14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 EPS8L1Q8TE68 723 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 EPB41L1Q9H4G0 881 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 SARS2Q9NP81 518 aaKnown RBP14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 KCND3Q9UK17 655 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 MAP4K5Q9Y4K4 846 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 PCDHGA6Q9Y5G7 932 aa14.18□□□□□ -0.14
PRPF40A-211ENST00000493468 FAM170AA1A519 330 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 A8MU76 341 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 BIN1O00499 593 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms