RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 NVLO15381 856 aaKnown RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 FZD6O60353 706 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 NOBOXO60393 691 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 CEACAM5P06731 702 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 TCF4P15884 667 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 HNRNPH3P31942 346 aaKnown RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 UGT1A5P35504 534 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 ETV3P41162 512 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 GPR3P46089 330 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 GPR1P46091 355 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 PDX1P52945 283 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 EPHB1P54762 984 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 MAXP61244 160 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 CDK3Q00526 305 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 ZFP36L1Q07352 338 aaKnown RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 TRAF2Q12933 501 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 TAF1BQ53T94 588 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 ANKRD20A8PQ5CZ79 823 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 TMEM164Q5U3C3 297 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 DENND2CQ68D51 928 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 RAET1GQ6H3X3 334 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 CCDC81Q6ZN84 652 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 ZNF765Q7L2R6 523 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 HSD11B1LQ7Z5J1 315 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 PIM3Q86V86 326 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 NRSN1Q8IZ57 195 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 Q8N9G6 341 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 ZNF564Q8TBZ8 553 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 PIH1D2Q8WWB5 315 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 BTBD6Q96KE9 485 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 NSMCE3Q96MG7 304 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 SEMA3CQ99985 751 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 FRMD8Q9BZ67 464 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 ZNHIT6Q9NWK9 470 aaKnown RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 CTTNBP2NLQ9P2B4 639 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 RABGEF1Q9UJ41 708 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 ACSL6Q9UKU0 697 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 SLC17A4Q9Y2C5 497 aa12.44□□□□□ -0.42
COL6A1-205ENST00000492851 TDRD6O60522 2096 aaKnown RBP12.44□□□□□ -0.42
COL6A1-205ENST00000492851 A0A1W2PNU3 283 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-205ENST00000492851 RGSL1A5PLK6 1076 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 GOLGA6CA6NDK9 693 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 GOLGA6BA6NDN3 693 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 NPIPB15A6NHN6 443 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-205ENST00000492851 B4DGG1 531 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 K7ENP7 123 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 PROSCO94903 275 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 CPNE6O95741 557 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 IVLP07476 585 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 TPM1P09493 284 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 GOLGA6DP0CG33 693 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 LHCGRP22888 699 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 CD82P27701 267 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 MAN1A1P33908 653 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 ARSEP51690 589 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 LRP8Q14114 963 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 DPYSL3Q14195 570 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 TCEA2Q15560 299 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 ARHGAP40Q5TG30 622 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 TXNRD3NBQ6F5E7 133 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 ALG1LQ6GMV1 187 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 INO80CQ6PI98 192 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-205ENST00000492851 ADAMTSL4Q6UY14 1074 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 Q6ZVL8 140 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 SPRED1Q7Z699 444 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 TECPR1Q7Z6L1 1165 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 C17orf82Q86X59 251 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-205ENST00000492851 EXD1Q8NHP7 514 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 ZDHHC1Q8WTX9 485 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 MAML1Q92585 1016 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 AP2M1Q96CW1 435 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 ZNF830Q96NB3 372 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-205ENST00000492851 CCNL2Q96S94 520 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-205ENST00000492851 DPYSL5Q9BPU6 564 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 CDH19Q9H159 772 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 CPNE5Q9HCH3 593 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 RBM22Q9NW64 420 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL6A1-205ENST00000492851 GOLGA6AQ9NYA3 693 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 SEPT10Q9P0V9 454 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 IFNKQ9P0W0 207 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 SUFUQ9UMX1 484 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 PCDHB11Q9Y5F2 797 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 RNF215Q9Y6U7 377 aa12.43□□□□□ -0.42
COL6A1-205ENST00000492851 A0A0J9YYE9 177 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 CBFA2T2O43439 604 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 TRBC1P01850 177 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 GYPCP04921 128 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 FGF1P05230 155 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 SLC5A2P31639 672 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 CASP14P31944 242 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 GNPDA1P46926 289 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 PTSQ03393 145 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 CFHR1Q03591 330 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 TRIM14Q14142 442 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 NR1D2Q14995 579 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 SLC18A3Q16572 532 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 LRRC66Q68CR7 880 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 XKR5Q6UX68 686 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 ZNF438Q7Z4V0 828 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms