RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 RBM44Q6ZP01 1051 aaKnown RBP23.63■■□□□ 1.37
CTDSP1-211ENST00000492545 TAF8Q7Z7C8 310 aa23.63■■□□□ 1.37
CTDSP1-211ENST00000492545 OLFM3Q96PB7 478 aa23.63■■□□□ 1.37
CTDSP1-211ENST00000492545 PANX2Q96RD6 677 aa23.63■■□□□ 1.37
CTDSP1-211ENST00000492545 ADGRE3Q9BY15 652 aa23.63■■□□□ 1.37
CTDSP1-211ENST00000492545 CYP4F12Q9HCS2 524 aa23.63■■□□□ 1.37
CTDSP1-211ENST00000492545 PCDHA13Q9Y5I0 950 aa23.63■■□□□ 1.37
CTDSP1-211ENST00000492545 ALG6Q9Y672 507 aa23.63■■□□□ 1.37
CTDSP1-211ENST00000492545 A0A0A6YYK5 440 aaPredicted RBP23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 PRSS38A1L453 326 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 ACTN2P35609 894 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 AP1B1Q10567 949 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 IHHQ14623 411 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 TAZQ16635 292 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 RAET1GQ6H3X3 334 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 ADAMTSL4Q6UY14 1074 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 RFX6Q8HWS3 928 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 PELI3Q8N2H9 469 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 FAM46DQ8NEK8 389 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 FGF11Q92914 225 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 RNF25Q96BH1 459 aaPredicted RBP23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 AP2M1Q96CW1 435 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 CCDC3Q9BQI4 270 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 TRNAU1APQ9NX07 287 aaKnown RBP23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 ZFHX4Q86UP3 3567 aa23.62■■□□□ 1.37
CTDSP1-211ENST00000492545 ZFYVE26Q68DK2 2539 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 RGSL1A5PLK6 1076 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 CEACAM5P06731 702 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 GPR1P46091 355 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 LSSP48449 732 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 STC1P52823 247 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 PERM1Q5SV97 790 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 CNTD1Q8N815 330 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 KYQ8NBH2 561 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 GPR156Q8NFN8 814 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 FRMD8Q9BZ67 464 aaPredicted RBP23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 TMEM168Q9H0V1 697 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 MRPL40Q9NQ50 206 aaKnown RBP23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 SIRPGQ9P1W8 387 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 MOSPD1Q9UJG1 213 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 LHX6Q9UPM6 363 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 SLC17A4Q9Y2C5 497 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 MYLKQ15746 1914 aa23.61■■□□□ 1.37
CTDSP1-211ENST00000492545 GOLGA6CA6NDK9 693 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 GOLGA6BA6NDN3 693 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 ANKRD66B4E2M5 251 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 BRINP1O60477 761 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 USP12O75317 370 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 DXOO77932 396 aaKnown RBP23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 GOLGA6DP0CG33 693 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 PNLIPP16233 465 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 CD86P42081 329 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 CDKN2BP42772 138 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 ZNF75DP51815 510 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 PTPRRQ15256 657 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 SLC14A2Q15849 920 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 KCTD16Q68DU8 428 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 MFSD7Q6UXD7 560 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 TMTC1Q8IUR5 882 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 SNIP1Q8TAD8 396 aaKnown RBP23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 KIAA1524Q8TCG1 905 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 GPBAR1Q8TDU6 330 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 LRRN4Q8WUT4 740 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 MLPHQ9BV36 600 aaPredicted RBP23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 GSDMCQ9BYG8 508 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 ABCG8Q9H221 673 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 POLR1BQ9H9Y6 1135 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 CARS2Q9HA77 564 aaKnown RBP23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 GOLGA6AQ9NYA3 693 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 PCDHB1Q9Y5F3 818 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 LAMA5O15230 3695 aa23.6■■□□□ 1.37
CTDSP1-211ENST00000492545 CELSR3Q9NYQ7 3312 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 TMX2-CTNND1H3BSU7 103 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 RRP8O43159 456 aaKnown RBP23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 ZRANB2O95218 330 aaKnown RBP eCLIP23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 IPO7O95373 1038 aaKnown RBP23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 IVLP07476 585 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 MMP2P08253 660 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 TNNT1P13805 278 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 GLB1P16278 677 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 SKOR1P84550 965 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 ILF3Q12906 894 aaKnown RBP eCLIP23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 ZBTB17Q13105 803 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 SPIDRQ14159 915 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 NYAP1Q6ZVC0 841 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 NT5DC3Q86UY8 548 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 RCOR2Q8IZ40 523 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 LPCAT1Q8NF37 534 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 CCHCR1Q8TD31 782 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 IMP4Q96G21 291 aaKnown RBP23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 ZNF578Q96N58 590 aaPredicted RBP23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 SLC25A51Q9H1U9 297 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 APPL1Q9UKG1 709 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 HYOU1Q9Y4L1 999 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 RP1P56715 2156 aa23.59■■□□□ 1.37
CTDSP1-211ENST00000492545 NTN3O00634 580 aaPredicted RBP23.58■■□□□ 1.37
CTDSP1-211ENST00000492545 MTSS1O43312 755 aa23.58■■□□□ 1.37
CTDSP1-211ENST00000492545 EIF2S3P41091 472 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms