RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 FBXO22Q8NEZ5 403 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 OR4L1Q8NH43 312 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 MAELQ96JY0 434 aaKnown RBP12.44□□□□□ -0.42
HMGN1-220ENST00000492280 CINPQ9BW66 212 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-220ENST00000492280 RNF38Q9H0F5 515 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 VTI1BQ9UEU0 232 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 SRRDQ9UH36 339 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 MED16Q9Y2X0 877 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 PIKFYVEQ9Y2I7 2098 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 FAM92AA1XBS5 289 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 NPEPPSL1A6NEC2 478 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 DRGXA6NNA5 263 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 SUPT3HB4E1H0 165 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 COCHO43405 550 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 SUPT3HO75486 399 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 GPC4O75487 556 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 RHOBTB1O94844 696 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 SEC24AO95486 1093 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 PRAMEF12O95522 483 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 ALDH1A3P47895 512 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 KIF19Q2TAC6 998 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 PARP15Q460N3 678 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 LHX8Q68G74 356 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 AAGABQ6PD74 315 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 CCDC117Q8IWD4 279 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-220ENST00000492280 PGAM4Q8N0Y7 254 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 PQLC1Q8N2U9 271 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 ARHGAP18Q8N392 663 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 CDKN2AIPNLQ96HQ2 116 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 PKP2Q99959 881 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 DONSONQ9NYP3 566 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 FKBPLQ9UIM3 349 aa12.44□□□□□ -0.42
HMGN1-220ENST00000492280 USP34Q70CQ2 3546 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 TRPC5OSA6NMA1 111 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 A8MX80 341 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 PSMD12O00232 456 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 NR5A2O00482 541 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 PIP5K1BO14986 540 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 LINC00032P0C843 101 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 MTHFD2P13995 350 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 NELFEP18615 380 aaKnown RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 FDXRP22570 491 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 CORO1AP31146 461 aaKnown RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 MAGEA11P43364 429 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 PSME3P61289 254 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 NKX3-2P78367 333 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 ACAP2Q15057 778 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 CPSF7Q8N684 471 aaKnown RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 NUDT8Q8WV74 236 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 JADE3Q92613 823 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 SLC22A12Q96S37 553 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 GPR21Q99679 349 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 TTPALQ9BTX7 342 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 VN1R3Q9BXE9 311 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 CACNA2D2Q9NY47 1150 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 IL37Q9NZH6 218 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 DTNAQ9Y4J8 743 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 PCDHGA7Q9Y5G6 932 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 DNAJC15Q9Y5T4 150 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 KIAA0100Q14667 2235 aaKnown RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 SZT2Q5T011 3432 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 PRORSD1PA6NEY8 169 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 ACSL4O60488 711 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 RPP40O75818 363 aaKnown RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 CDK14O94921 469 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 RTN3O95197 1032 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 RPLP2P05387 115 aaKnown RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 SPATA31D3P0C874 917 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 ETS2P15036 469 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 SELPP16109 830 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 APLP1P51693 650 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 KPNA2P52292 529 aaKnown RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 DNAJB13P59910 316 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 CAPRIN1Q14444 709 aaKnown RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 SETMARQ53H47 684 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 ATXN7L2Q5T6C5 722 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 THEMIS2Q5TEJ8 643 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 IL23RQ5VWK5 629 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 UGT3A1Q6NUS8 523 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 SPATA31D4Q6ZUB0 917 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 LRRC49Q8IUZ0 686 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 SIDT2Q8NBJ9 832 aaKnown RBP12.43□□□□□ -0.42
HMGN1-220ENST00000492280 C19orf60Q96EN9 201 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 TSPAN17Q96FV3 270 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 DCUN1D1Q96GG9 259 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 CDK15Q96Q40 435 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 RANBP9Q96S59 729 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 CCDC28BQ9BUN5 200 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 TM6SF2Q9BZW4 377 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 AKTIPQ9H8T0 292 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 EFCAB1Q9HAE3 211 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 PLK2Q9NYY3 685 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 SQORQ9Y6N5 450 aa12.43□□□□□ -0.42
HMGN1-220ENST00000492280 A0A1B0GTW7 788 aa12.42□□□□□ -0.42
HMGN1-220ENST00000492280 MAGEA13PA6NCF6 341 aa12.42□□□□□ -0.42
HMGN1-220ENST00000492280 OR6C75A6NL08 312 aa12.42□□□□□ -0.42
HMGN1-220ENST00000492280 SRP72O76094 671 aaKnown RBP12.42□□□□□ -0.42
HMGN1-220ENST00000492280 WISP3O95389 354 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms