RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 ZBTB17Q13105 803 aa27.07■■□□□ 1.92
SH3GL3-204ENST00000492099 TFDP2Q14188 446 aa27.07■■□□□ 1.92
SH3GL3-204ENST00000492099 TCEA2Q15560 299 aa27.07■■□□□ 1.92
SH3GL3-204ENST00000492099 NLRP8Q86W28 1048 aa27.07■■□□□ 1.92
SH3GL3-204ENST00000492099 RAVER1Q8IY67 606 aaKnown RBP27.07■■□□□ 1.92
SH3GL3-204ENST00000492099 CNTD1Q8N815 330 aa27.07■■□□□ 1.92
SH3GL3-204ENST00000492099 WDR48Q8TAF3 677 aa27.07■■□□□ 1.92
SH3GL3-204ENST00000492099 GOLGA6AQ9NYA3 693 aa27.07■■□□□ 1.92
SH3GL3-204ENST00000492099 MOSPD1Q9UJG1 213 aa27.07■■□□□ 1.92
SH3GL3-204ENST00000492099 CD86P42081 329 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 CDKN2BP42772 138 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 NR2C2P49116 596 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 DYNLT1P63172 113 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 CDK3Q00526 305 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 PERM1Q5SV97 790 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 NPNTQ6UXI9 565 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 TAF8Q7Z7C8 310 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 LPCAT1Q8NF37 534 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 OR6C4Q8NGE1 309 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 GRAMD1AQ96CP6 724 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 LYSMD1Q96S90 227 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 SIRPGQ9P1W8 387 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 MYLKQ15746 1914 aa27.06■■□□□ 1.92
SH3GL3-204ENST00000492099 CFAP47Q6ZTR5 3102 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 A0A0U1RQS6 177 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 CSO75390 466 aaKnown RBP27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 TCEA3O75764 348 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 PYGLP06737 847 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 MMP2P08253 660 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 GPR1P46091 355 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 STC1P52823 247 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 SKOR1P84550 965 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 TAZQ16635 292 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 ZNF765Q7L2R6 523 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 TMTC1Q8IUR5 882 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 NRSN1Q8IZ57 195 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 KYQ8NBH2 561 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 AP2M1Q96CW1 435 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 SMIM14Q96QK8 99 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 ADGRE3Q9BY15 652 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 TMEM168Q9H0V1 697 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 ABCG8Q9H221 673 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 GPSM3Q9Y4H4 160 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 LRP4O75096 1905 aa27.05■■□□□ 1.92
SH3GL3-204ENST00000492099 CEACAM5P06731 702 aa27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 C11orf63Q6NUN7 778 aa27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 CALR3Q96L12 384 aaKnown RBP27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 CCDC3Q9BQI4 270 aa27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 MLPHQ9BV36 600 aaPredicted RBP27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 FRMD8Q9BZ67 464 aaPredicted RBP27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 CARS2Q9HA77 564 aaKnown RBP27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 SEPT10Q9P0V9 454 aa27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 CD84Q9UIB8 345 aa27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 PCDHB1Q9Y5F3 818 aa27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 EPN1Q9Y6I3 576 aaPredicted RBP27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 ASXL3Q9C0F0 2248 aa27.04■■□□□ 1.92
SH3GL3-204ENST00000492099 ANKRD66B4E2M5 251 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 ZRANB2O95218 330 aaKnown RBP eCLIP27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 IPO7O95373 1038 aaKnown RBP27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 FECHP22830 423 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 ISXQ2M1V0 245 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 OGFOD3Q6PK18 319 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 ADAMTSL4Q6UY14 1074 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 SPOCD1Q6ZMY3 1216 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 RBM44Q6ZP01 1051 aaKnown RBP27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 RFLNAQ6ZTI6 216 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 NT5DC3Q86UY8 548 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 KATNAL2Q8IYT4 538 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 RCOR2Q8IZ40 523 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 FAM46DQ8NEK8 389 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 GPR156Q8NFN8 814 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 AGAP3Q96P47 875 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 CHD6Q8TD26 2715 aa27.03■■□□□ 1.92
SH3GL3-204ENST00000492099 CST8O60676 142 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 USP12O75317 370 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 NDUFA10O95299 355 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 CLDN7O95471 211 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 QPCTQ16769 361 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 TFDP3Q5H9I0 405 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 KAZNQ674X7 775 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 GPBAR1Q8TDU6 330 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 SCAMP4Q969E2 229 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 IMP4Q96G21 291 aaKnown RBP27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 CEP41Q9BYV8 373 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 SLC25A51Q9H1U9 297 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 GOLPH3Q9H4A6 298 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 TRNAU1APQ9NX07 287 aaKnown RBP27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 TFR2Q9UP52 801 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 SLC17A4Q9Y2C5 497 aa27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 URB1O60287 2271 aaKnown RBP27.02■■□□□ 1.92
SH3GL3-204ENST00000492099 A0A087WV48 116 aa27.01■■□□□ 1.91
SH3GL3-204ENST00000492099 C1orf232A0A0U1RR37 186 aa27.01■■□□□ 1.91
SH3GL3-204ENST00000492099 SOWAHDA6NJG2 315 aa27.01■■□□□ 1.91
SH3GL3-204ENST00000492099 BRINP1O60477 761 aa27.01■■□□□ 1.91
SH3GL3-204ENST00000492099 SOD1P00441 154 aa27.01■■□□□ 1.91
SH3GL3-204ENST00000492099 ILF3Q12906 894 aaKnown RBP eCLIP27.01■■□□□ 1.911e-11■■■■□ 22.1
SH3GL3-204ENST00000492099 TEX44Q53QW1 395 aa27.01■■□□□ 1.91
SH3GL3-204ENST00000492099 DAAM2Q86T65 1068 aa27.01■■□□□ 1.91
SH3GL3-204ENST00000492099 LSMEM2Q8N112 164 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms