RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 KRT24Q2M2I5 525 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 C2orf68Q2NKX9 166 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 ZSCAN23Q3MJ62 389 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 PPP6R3Q5H9R7 873 aaPredicted RBP3.96□□□□□ -1.78
VTA1-204ENST00000491881 ANKRD54Q6NXT1 300 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.96□□□□□ -1.78
VTA1-204ENST00000491881 TEX11Q8IYF3 940 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 WDTC1Q8N5D0 677 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 CREB3L4Q8TEY5 395 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 ZKSCAN4Q969J2 545 aaPredicted RBP3.96□□□□□ -1.78
VTA1-204ENST00000491881 RRNAD1Q96FB5 475 aaKnown RBP3.96□□□□□ -1.78
VTA1-204ENST00000491881 LYZL4Q96KX0 146 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 SLC25A33Q9BSK2 321 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 PCGF1Q9BSM1 259 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 SMARCAD1Q9H4L7 1026 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 ESRP2Q9H6T0 727 aaKnown RBP3.96□□□□□ -1.78
VTA1-204ENST00000491881 CNGB3Q9NQW8 809 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 AGO1Q9UL18 857 aaKnown RBP3.96□□□□□ -1.78
VTA1-204ENST00000491881 TTC7AQ9ULT0 858 aaPredicted RBP3.96□□□□□ -1.78
VTA1-204ENST00000491881 PCDHA7Q9UN72 937 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 SESN1Q9Y6P5 492 aa3.96□□□□□ -1.78
VTA1-204ENST00000491881 A6NCN8 305 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 VCYO14598 125 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 HCRTR2O43614 444 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 GLUD1P00367 558 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 TMEM11P17152 192 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 MCM3P25205 808 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 CDKN2AP42771 156 aaKnown RBP3.95□□□□□ -1.78
VTA1-204ENST00000491881 GLUD2P49448 558 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 TFAP4Q01664 338 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 EGR4Q05215 589 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 LRMPQ12912 555 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 PRKG2Q13237 762 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 EIF2S3LQ2VIR3 472 aaKnown RBP3.95□□□□□ -1.78
VTA1-204ENST00000491881 SPATA1Q5VX52 437 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 FAM205BPQ63HN1 556 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 SIGIRRQ6IA17 410 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 PLEKHA7Q6IQ23 1121 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 PDXDC1Q6P996 788 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 SLC36A4Q6YBV0 504 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 GLDNQ6ZMI3 551 aaPredicted RBP3.95□□□□□ -1.78
VTA1-204ENST00000491881 PQLC2Q6ZP29 291 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 FASTKD5Q7L8L6 764 aaKnown RBP3.95□□□□□ -1.78
VTA1-204ENST00000491881 CACNA2D4Q7Z3S7 1137 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 PCGF5Q86SE9 256 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 TICAM1Q8IUC6 712 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 RPAP2Q8IXW5 612 aaPredicted RBP3.95□□□□□ -1.78
VTA1-204ENST00000491881 SPATA6LQ8N4H0 392 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 OR14L1PQ8NHC6 308 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 FAM216AQ8WUB2 273 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 MIB2Q96AX9 1013 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 MTBPQ96DY7 904 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 SH3GL2Q99962 352 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 TMEM204Q9BSN7 226 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 HAUS8Q9BT25 410 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 MAK16Q9BXY0 300 aaKnown RBP3.95□□□□□ -1.78
VTA1-204ENST00000491881 SEZ6LQ9BYH1 1024 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 C17orf75Q9HAS0 396 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 VPS28Q9UK41 221 aa3.95□□□□□ -1.78
VTA1-204ENST00000491881 ATXN2Q99700 1313 aaKnown RBP3.95□□□□□ -1.78
VTA1-204ENST00000491881 FAM90A8PA6NJQ4 464 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 SCAMP1O15126 338 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 VILLO15195 856 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 GFPT2O94808 682 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 FTCDO95954 541 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 ACAA1P09110 424 aaPredicted RBP3.94□□□□□ -1.78
VTA1-204ENST00000491881 CLTBP09497 229 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 FAM90A13PP0C7W8 464 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 FAM90A24PP0C7X0 464 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 ALOX12P18054 663 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 MAOAP21397 527 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 TM4SF1P30408 202 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 HADHAP40939 763 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 HTR6P50406 440 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 GALCP54803 685 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 CDH8P55286 799 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 ZBED6P86452 979 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 MC1RQ01726 317 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 DDR1Q08345 913 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 EFNB3Q15768 340 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 ADIPOQQ15848 244 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 CTF1Q16619 201 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 KRTAP27-1Q3LI81 207 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 CDONQ4KMG0 1287 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 SEPT14Q6ZU15 432 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 DPPA4Q7L190 304 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 TAOK1Q7L7X3 1001 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 ZBTB8BQ8NAP8 495 aaPredicted RBP3.94□□□□□ -1.78
VTA1-204ENST00000491881 C1orf131Q8NDD1 294 aaKnown RBP3.94□□□□□ -1.78
VTA1-204ENST00000491881 CAMK1GQ96NX5 476 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 ACOX2Q99424 681 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 CWC15Q9P013 229 aaKnown RBP3.94□□□□□ -1.78
VTA1-204ENST00000491881 WNT16Q9UBV4 365 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 SLC9A2Q9UBY0 812 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 ZNF215Q9UL58 517 aaPredicted RBP3.94□□□□□ -1.78
VTA1-204ENST00000491881 PROCRQ9UNN8 238 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 GPR34Q9UPC5 381 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 R3HDM2Q9Y2K5 976 aaKnown RBP3.94□□□□□ -1.78
VTA1-204ENST00000491881 SNX9Q9Y5X1 595 aa3.94□□□□□ -1.78
VTA1-204ENST00000491881 A0A0U1RQJ8 604 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms