RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 FAM174AQ8TBP5 190 aa15.06■□□□□ 0
CDC42SE1-205ENST00000491825 MS4A14Q96JA4 679 aa15.06■□□□□ 0
CDC42SE1-205ENST00000491825 C16orf45Q96MC5 204 aaPredicted RBP15.06■□□□□ 0
CDC42SE1-205ENST00000491825 PPP1R2P1Q96PQ5 205 aa15.06■□□□□ 0
CDC42SE1-205ENST00000491825 FCRL5Q96RD9 977 aa15.06■□□□□ 0
CDC42SE1-205ENST00000491825 KLF6Q99612 283 aaPredicted RBP15.06■□□□□ 0
CDC42SE1-205ENST00000491825 SLC17A9Q9BYT1 436 aa15.06■□□□□ 0
CDC42SE1-205ENST00000491825 C10orf88Q9H8K7 445 aa15.06■□□□□ 0
CDC42SE1-205ENST00000491825 RNF14Q9UBS8 474 aa15.06■□□□□ 0
CDC42SE1-205ENST00000491825 CLCA2Q9UQC9 943 aa15.06■□□□□ 0
CDC42SE1-205ENST00000491825 TTC24A2A3L6 582 aaPredicted RBP15.05■□□□□ -0
CDC42SE1-205ENST00000491825 KIF2AO00139 706 aaPredicted RBP15.05■□□□□ -0
CDC42SE1-205ENST00000491825 AREL1O15033 823 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 FFAR2O15552 330 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 GCATO75600 419 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 PGLSO95336 258 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 CKMT1AP12532 417 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 NFKB1P19838 968 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 CASQ1P31415 396 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 EIF2S3P41091 472 aaKnown RBP15.05■□□□□ -0
CDC42SE1-205ENST00000491825 CD86P42081 329 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 GDF10P55107 478 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 RPL26P61254 145 aaKnown RBP15.05■□□□□ -0
CDC42SE1-205ENST00000491825 POLR2LP62875 67 aaKnown RBP15.05■□□□□ -0
CDC42SE1-205ENST00000491825 SEMG2Q02383 582 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 FZD2Q14332 565 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 UGP2Q16851 508 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 ANKRD20A2Q5SQ80 823 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 TPRG1LQ5T0D9 272 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 ANKRD20A1Q5TYW2 823 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 ANKRD20A3Q5VUR7 823 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 SYT10Q6XYQ8 523 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 Q6ZSR6 202 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 PID1Q7Z2X4 250 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 PTAR1Q7Z6K3 402 aaPredicted RBP15.05■□□□□ -0
CDC42SE1-205ENST00000491825 ZSWIM9Q86XI8 627 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 CREG2Q8IUH2 290 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 KLHDC8BQ8IXV7 354 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 FAM71DQ8N9W8 422 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 SNIP1Q8TAD8 396 aaKnown RBP15.05■□□□□ -0
CDC42SE1-205ENST00000491825 C1QTNF2Q9BXJ5 285 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 NLGN3Q9NZ94 848 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 GGT7Q9UJ14 662 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 RPL26L1Q9UNX3 145 aaKnown RBP15.05■□□□□ -0
CDC42SE1-205ENST00000491825 DRG1Q9Y295 367 aaKnown RBP15.05■□□□□ -0
CDC42SE1-205ENST00000491825 PCDHGC4Q9Y5F7 938 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 RAI2Q9Y5P3 530 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 KNTC1P50748 2209 aa15.05■□□□□ -0
CDC42SE1-205ENST00000491825 DOCK9Q9BZ29 2069 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 GOLGA6L10A0A0M3HER8 536 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 SPTY2D1-AS1A0A0U1RR47 76 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 PAK4O96013 591 aaPredicted RBP15.04■□□□□ -0
CDC42SE1-205ENST00000491825 CPP00450 1065 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 NME1P15531 152 aaKnown RBP15.04■□□□□ -0
CDC42SE1-205ENST00000491825 TIMP2P16035 220 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 ITPKBP27987 946 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 ABCG1P45844 678 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 E2F1Q01094 437 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 ELP6Q0PNE2 266 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 ZNF542PQ5EBM4 170 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 ARMC12Q5T9G4 340 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 CDCP2Q5VXM1 449 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 KDM7AQ6ZMT4 941 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 PARGQ86W56 976 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 DCP2Q8IU60 420 aaKnown RBP15.04■□□□□ -0
CDC42SE1-205ENST00000491825 FAM181AQ8N9Y4 354 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 FEM1CQ96JP0 617 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 APOLD1Q96LR9 279 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 DCBLD2Q96PD2 775 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 LENG8Q96PV6 779 aaPredicted RBP15.04■□□□□ -0
CDC42SE1-205ENST00000491825 MCCC1Q96RQ3 725 aaPredicted RBP15.04■□□□□ -0
CDC42SE1-205ENST00000491825 RBM15Q96T37 977 aaKnown RBP eCLIP15.04■□□□□ -0
CDC42SE1-205ENST00000491825 RSPH14Q9UHP6 348 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 KLF15Q9UIH9 416 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 ZNF148Q9UQR1 794 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 ITM2BQ9Y287 266 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 PPIL1Q9Y3C6 166 aa15.04■□□□□ -0
CDC42SE1-205ENST00000491825 SCAMP1O15126 338 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 TSPAN6O43657 245 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 BRINP1O60477 761 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 ANXA9O76027 345 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 MT-CO3P00414 261 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 CSF2P04141 144 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 NFKBIAP25963 317 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 MMP12P39900 470 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 RABIFP47224 123 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 PFN3P60673 137 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 HNRNPKP61978 463 aaKnown RBP eCLIP15.03■□□□□ -03e-7■■□□□ 12.8
CDC42SE1-205ENST00000491825 DAB2P98082 770 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 MPP3Q13368 585 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 ERAP2Q6P179 960 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 TTC7BQ86TV6 843 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 DENND6BQ8NEG7 585 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 ZNF548Q8NEK5 533 aaPredicted RBP15.03■□□□□ -0
CDC42SE1-205ENST00000491825 CCDC110Q8TBZ0 833 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 ASB12Q8WXK4 309 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 TRIB3Q96RU7 358 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 GORASP1Q9BQQ3 440 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 AP1M1Q9BXS5 423 aa15.03■□□□□ -0
CDC42SE1-205ENST00000491825 PCDH9Q9HC56 1237 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms