RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 CALML6Q8TD86 181 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 BRSK1Q8TDC3 778 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 EPS8L3Q8TE67 593 aaKnown RBP13.53□□□□□ -0.24
NUP188-208ENST00000491502 MTBPQ96DY7 904 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 MYO19Q96H55 970 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 MRGPRX3Q96LB0 322 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 RTKNQ9BST9 563 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 TDRD1Q9BXT4 1180 aaKnown RBP13.53□□□□□ -0.24
NUP188-208ENST00000491502 CPEB1Q9BZB8 566 aaKnown RBP13.53□□□□□ -0.24
NUP188-208ENST00000491502 TRABDQ9H4I3 376 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 WSB2Q9NYS7 404 aaPredicted RBP13.53□□□□□ -0.24
NUP188-208ENST00000491502 MOCS1Q9NZB8 636 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 ZFATQ9P243 1243 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 EVLQ9UI08 416 aaPredicted RBP13.53□□□□□ -0.24
NUP188-208ENST00000491502 ZNF180Q9UJW8 692 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 SCML1Q9UN30 329 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 ACTL7BQ9Y614 415 aa13.53□□□□□ -0.24
NUP188-208ENST00000491502 NYNRINQ9P2P1 1898 aaKnown RBP13.53□□□□□ -0.24
NUP188-208ENST00000491502 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 FAM159BA6NKW6 160 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 C2orf81A6NN90 581 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 MT-CO1P00395 513 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 DNTTP04053 509 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 KRT15P19012 456 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 PTGER3P43115 390 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 POLR2LP62875 67 aaKnown RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 SEPT6Q14141 434 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 POU6F1Q14863 301 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 SF3A2Q15428 464 aaKnown RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 DLG2Q15700 870 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 CCDC6Q16204 474 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 UGP2Q16851 508 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 MYLK3Q32MK0 819 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 KBTBD12Q3ZCT8 623 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 TTC31Q49AM3 519 aaPredicted RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 WDR45BQ5MNZ6 344 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 FAM182AQ5T1J6 154 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 ZNF776Q68DI1 518 aaPredicted RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 ADGRD1Q6QNK2 874 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 ERMP1Q7Z2K6 904 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 AGGF1Q8N302 714 aaeCLIP13.52□□□□□ -0.25
NUP188-208ENST00000491502 PPM1NQ8N819 430 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 ZNF366Q8N895 744 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 CADM4Q8NFZ8 388 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 SLC44A1Q8WWI5 657 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 SPOCK2Q92563 424 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 CERS2Q96G23 380 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 TOE1Q96GM8 510 aaKnown RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 LRIG1Q96JA1 1093 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 EXOC2Q96KP1 924 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 ZNF641Q96N77 438 aaPredicted RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 PAFAH2Q99487 392 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 WDR83Q9BRX9 315 aaKnown RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 PCED1AQ9H1Q7 454 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 RSPH9Q9H1X1 276 aaPredicted RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 CNOT10Q9H9A5 744 aaKnown RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 PIH1D1Q9NWS0 290 aaKnown RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 SLCO3A1Q9UIG8 710 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 NOVA2Q9UNW9 492 aaKnown RBP13.52□□□□□ -0.25
NUP188-208ENST00000491502 NCKAP1Q9Y2A7 1128 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 CEP250Q9BV73 2442 aa13.52□□□□□ -0.25
NUP188-208ENST00000491502 GON4LQ3T8J9 2241 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 CEP192Q8TEP8 1941 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 H3BQF6 201 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 SLC30A4O14863 429 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 SIN3BO75182 1162 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 ATXN1LP0C7T5 689 aaKnown RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 CTSOP43234 321 aaPredicted RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 GRIA4P48058 902 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 RPS14P62263 151 aaKnown RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 CRADDP78560 199 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 DNAJC3Q13217 504 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 OLIG2Q13516 323 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 THOC5Q13769 683 aaKnown RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 DUOXA1Q1HG43 343 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 TTMPQ5BVD1 217 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 C9orf64Q5T6V5 341 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 PEAR1Q5VY43 1037 aaPredicted RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 KIAA0930Q6ICG6 404 aaPredicted RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 MARK2Q7KZI7 788 aaKnown RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 ARMCX6Q7L4S7 300 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 ARL8AQ96BM9 186 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 RPL10LQ96L21 214 aaKnown RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 TRIB3Q96RU7 358 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 CPNE1Q99829 537 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 C19orf43Q9BQ61 176 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 FAM167BQ9BTA0 163 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 NUSAP1Q9BXS6 441 aaKnown RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 OSBPL1AQ9BXW6 950 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 TM6SF2Q9BZW4 377 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 CHRAC1Q9NRG0 131 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 C20orf96Q9NUD7 363 aaPredicted RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.51□□□□□ -0.257e-10■■■■■ 33.2
NUP188-208ENST00000491502 HECAQ9UBI9 543 aaPredicted RBP13.51□□□□□ -0.25
NUP188-208ENST00000491502 SUSD2Q9UGT4 822 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 PILRBQ9UKJ0 227 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 CHKBQ9Y259 395 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 ACTL7AQ9Y615 435 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 SHROOM3Q8TF72 1996 aa13.51□□□□□ -0.25
NUP188-208ENST00000491502 TTC34A8MYJ7 566 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms