RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 EIF2S1P05198 315 aaKnown RBP4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 DAOP14920 347 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 MAOAP21397 527 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 PIK3CAP42336 1068 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 CEBPZQ03701 1054 aaKnown RBP4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 TRAF3Q13114 568 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 KEAP1Q14145 624 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 NFATC4Q14934 902 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 KRT24Q2M2I5 525 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 ZSCAN23Q3MJ62 389 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 ZNF324BQ6AW86 544 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 TTI2Q6NXR4 508 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 FAM122CQ6P4D5 195 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 CCNI2Q6ZMN8 369 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 PQLC2Q6ZP29 291 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 CACNA2D4Q7Z3S7 1137 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 NGEFQ8N5V2 710 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 RND1Q92730 232 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 RRNAD1Q96FB5 475 aaKnown RBP4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 ADGRG7Q96K78 797 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 CSF3RQ99062 836 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 NCAPGQ9BPX3 1015 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 C1QTNF5Q9BXJ0 243 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 RANGRFQ9HD47 186 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 CD93Q9NPY3 652 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 EIF2B3Q9NR50 452 aaKnown RBP4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 PCDHGB1Q9Y5G3 927 aa4.91□□□□□ -1.62
HMGB1P38-201ENST00000490557 PLRG1O43660 514 aaKnown RBP4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 MLYCDO95822 493 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 ACADMP11310 421 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 ZNF12P17014 697 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 BDKRB2P30411 391 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 NAP1L1P55209 391 aaKnown RBP4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 TNFAIP1Q13829 316 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 EIF4A2Q14240 407 aaKnown RBP4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 SF3B4Q15427 424 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 NAB2Q15742 525 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 FAM69BQ5VUD6 431 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 HIST2H2BCQ6DN03 193 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 HIST2H2BDQ6DRA6 164 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 PLEKHA7Q6IQ23 1121 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 RGMBQ6NW40 437 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 TMEM154Q6P9G4 183 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 NCEH1Q6PIU2 408 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 MEPCEQ7L2J0 689 aaKnown RBP4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 ARHGAP12Q8IWW6 846 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 OR14L1PQ8NHC6 308 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 MAGEC3Q8TD91 643 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 SGCDQ92629 289 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 ARHGEF26Q96DR7 871 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 PERPQ96FX8 193 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 KAT14Q9H8E8 782 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 POLR1BQ9H9Y6 1135 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 ABI3Q9P2A4 366 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 CNOT8Q9UFF9 292 aaKnown RBP4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 MTMR6Q9Y217 621 aa4.9□□□□□ -1.63
HMGB1P38-201ENST00000490557 PLSCR5A0PG75 271 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 DENND3A2RUS2 1198 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 CPED1A4D0V7 1026 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 LIPT2A6NK58 231 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 PROB1E7EW31 1015 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 ZBED4O75132 1171 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 ZBTB11O95625 1053 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 EGFP01133 1207 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 FGF3P11487 239 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 SRCP12931 536 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 LAMP2P13473 410 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 PLA2G2AP14555 144 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 CDH2P19022 906 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 PDLIM4P50479 330 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 CLCNKAP51800 687 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 DCAF7P61962 342 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 CSNK2A1P68400 391 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 PRAMEP78395 509 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 TFAP4Q01664 338 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 FOXM1Q08050 763 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 NIPAL4Q0D2K0 466 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 LRMPQ12912 555 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 HNRNPA0Q13151 305 aaKnown RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 SNTA1Q13424 505 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 KIF19Q2TAC6 998 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 CXorf66Q5JRM2 361 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 PAPPA-AS1Q5QFB9 102 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 CAPRIN2Q6IMN6 1127 aaKnown RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 SARM1Q6SZW1 724 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 IKBIPQ70UQ0 350 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 TBC1D1Q86TI0 1168 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 ANKRD52Q8NB46 1076 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 CSNK2A3Q8NEV1 391 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 SCMH1Q96GD3 660 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 WDFY2Q96P53 400 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 ZNF385AQ96PM9 386 aaKnown RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 MUC13Q9H3R2 512 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 SMARCAL1Q9NZC9 954 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 SIX4Q9UIU6 781 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 CORO1CQ9ULV4 474 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 VDAC3Q9Y277 283 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 LYVE1Q9Y5Y7 322 aa4.89□□□□□ -1.63
HMGB1P38-201ENST00000490557 TRIP12Q14669 1992 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms