RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CYP2A6P11509 494 aaPredicted RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 MYF5P13349 255 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 SLC1A1P43005 524 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 HADHBP55084 474 aaKnown RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 INHBCP55103 352 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 NAP1L1P55209 391 aaKnown RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 LBRQ14739 615 aaKnown RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 PDK2Q15119 407 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 PERM1Q5SV97 790 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 OGFOD3Q6PK18 319 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 TMCO3Q6UWJ1 677 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 LIPIQ6XZB0 460 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 RD3Q7Z3Z2 195 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 TAF8Q7Z7C8 310 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 FBXO39Q8N4B4 442 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 GPR156Q8NFN8 814 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 TSACCQ96A04 125 aaPredicted RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 NAF1Q96HR8 494 aaKnown RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 B3GNT4Q9C0J1 378 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 TCEAL2Q9H3H9 227 aaPredicted RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 SYNDIG1Q9H7V2 258 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 LUC7LQ9NQ29 371 aaKnown RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 PHPT1Q9NRX4 125 aaPredicted RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 SEPT10Q9P0V9 454 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 RCOR3Q9P2K3 495 aaPredicted RBP10.38□□□□□ -0.75
TTC28-207ENST00000490475 ACSL6Q9UKU0 697 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 DNPEPQ9ULA0 475 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 COQ6Q9Y2Z9 468 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 OR1A2Q9Y585 309 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 LRP4O75096 1905 aa10.38□□□□□ -0.75
TTC28-207ENST00000490475 KIF26BQ2KJY2 2108 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 ARHGEF17Q96PE2 2063 aaPredicted RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 LRRD1A4D1F6 860 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 C3orf70A6NLC5 250 aaPredicted RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 K7ENP7 123 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 TRAFD1O14545 582 aaPredicted RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 PJA2O43164 708 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 HTRA2O43464 458 aaPredicted RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 SPOPO43791 374 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 TNFSF15O95150 251 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 RPLP0P05388 317 aaKnown RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 JMJD7P0C870 316 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 MYCLP1P12525 358 aaPredicted RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 CA4P22748 312 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 CES1P23141 567 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 CD82P27701 267 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 TEAD1P28347 426 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 VAV2P52735 878 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 GSDMDP57764 484 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 CFHR1Q03591 330 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 ILF3Q12906 894 aaKnown RBP eCLIP10.37□□□□□ -0.75
TTC28-207ENST00000490475 ARHGEF7Q14155 803 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 ACOX1Q15067 660 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 ARHGAP40Q5TG30 622 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 LRRC38Q5VT99 294 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 PNCKQ6P2M8 343 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 INO80CQ6PI98 192 aaPredicted RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 CCDC81Q6ZN84 652 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 RAB11FIP2Q7L804 512 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 ZNF605Q86T29 641 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 KIAA1328Q86T90 577 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 CCNJLQ8IV13 435 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 MAP7D3Q8IWC1 876 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 RHOT1Q8IXI2 618 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 RAVER1Q8IY67 606 aaKnown RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 PQLC3Q8N755 202 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 KYQ8NBH2 561 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 LRRN4Q8WUT4 740 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 CCDC74AQ96AQ1 378 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 RNF25Q96BH1 459 aaPredicted RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 NUDCD1Q96RS6 583 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 CMKLR1Q99788 373 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 DPYSL5Q9BPU6 564 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 GSDMCQ9BYG8 508 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 LRRN3Q9H3W5 708 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 TRNAU1APQ9NX07 287 aaKnown RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 SIRPGQ9P1W8 387 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 TRIM10Q9UDY6 481 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 PHTF1Q9UMS5 762 aa10.37□□□□□ -0.75
TTC28-207ENST00000490475 SMG1Q96Q15 3661 aaKnown RBP10.37□□□□□ -0.75
TTC28-207ENST00000490475 COL27A1Q8IZC6 1860 aaPredicted RBP10.36□□□□□ -0.75
TTC28-207ENST00000490475 MGAQ8IWI9 3026 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 PRSS38A1L453 326 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 NVLO15381 856 aaKnown RBP10.36□□□□□ -0.75
TTC28-207ENST00000490475 MAP3K6O95382 1288 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 ITIH2P19823 946 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 VIPR1P32241 457 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 SLC10A2Q12908 348 aaPredicted RBP10.36□□□□□ -0.75
TTC28-207ENST00000490475 RALGDSQ12967 914 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 BIRC2Q13490 618 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 LLGL1Q15334 1064 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 C14orf28Q4W4Y0 310 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 CERCAMQ5T4B2 595 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 TMEM164Q5U3C3 297 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 MARC1Q5VT66 337 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 NCBP2-AS2Q69YL0 99 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 TIGD7Q6NT04 549 aaPredicted RBP10.36□□□□□ -0.75
TTC28-207ENST00000490475 FOXR1Q6PIV2 292 aa10.36□□□□□ -0.75
TTC28-207ENST00000490475 CRTC1Q6UUV9 634 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms