RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 RUFY1Q96T51 708 aa3□□□□□ -1.93
CALD1-221ENST00000489019 PSMB7Q99436 277 aa3□□□□□ -1.93
CALD1-221ENST00000489019 MOV10L1Q9BXT6 1211 aaKnown RBP3□□□□□ -1.93
CALD1-221ENST00000489019 SPRTNQ9H040 489 aaPredicted RBP3□□□□□ -1.93
CALD1-221ENST00000489019 INTS2Q9H0H0 1204 aaKnown RBP3□□□□□ -1.93
CALD1-221ENST00000489019 MYLK2Q9H1R3 596 aa3□□□□□ -1.93
CALD1-221ENST00000489019 GANQ9H2C0 597 aa3□□□□□ -1.93
CALD1-221ENST00000489019 ACAD9Q9H845 621 aa3□□□□□ -1.93
CALD1-221ENST00000489019 ANKZF1Q9H8Y5 726 aa3□□□□□ -1.93
CALD1-221ENST00000489019 PNPLA8Q9NP80 782 aa3□□□□□ -1.93
CALD1-221ENST00000489019 SNX15Q9NRS6 342 aa3□□□□□ -1.93
CALD1-221ENST00000489019 AGPAT3Q9NRZ7 376 aa3□□□□□ -1.93
CALD1-221ENST00000489019 GAR1Q9NY12 217 aaKnown RBP3□□□□□ -1.93
CALD1-221ENST00000489019 HOXC10Q9NYD6 342 aa3□□□□□ -1.93
CALD1-221ENST00000489019 RRN3Q9NYV6 651 aa3□□□□□ -1.93
CALD1-221ENST00000489019 GGA3Q9NZ52 723 aa3□□□□□ -1.93
CALD1-221ENST00000489019 AIPL1Q9NZN9 384 aa3□□□□□ -1.93
CALD1-221ENST00000489019 WRAP73Q9P2S5 460 aaPredicted RBP3□□□□□ -1.93
CALD1-221ENST00000489019 SLC9A2Q9UBY0 812 aa3□□□□□ -1.93
CALD1-221ENST00000489019 ZNF69Q9UC07 566 aa3□□□□□ -1.93
CALD1-221ENST00000489019 NKX1-2Q9UD57 310 aaPredicted RBP3□□□□□ -1.93
CALD1-221ENST00000489019 PGAP2Q9UHJ9 254 aa3□□□□□ -1.93
CALD1-221ENST00000489019 DNAJC12Q9UKB3 198 aa3□□□□□ -1.93
CALD1-221ENST00000489019 PCDHA10Q9Y5I2 948 aa3□□□□□ -1.93
CALD1-221ENST00000489019 SCINQ9Y6U3 715 aa3□□□□□ -1.93
CALD1-221ENST00000489019 KIF13BQ9NQT8 1826 aa3□□□□□ -1.93
CALD1-221ENST00000489019 EMSYQ7Z589 1322 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 A0A087WV62 115 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 A0A087X0T9 212 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 FAM170AA1A519 330 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 TARSL2A2RTX5 802 aaKnown RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 DENND3A2RUS2 1198 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 GTPBP10A4D1E9 387 aaKnown RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 POM121BA6NF01 834 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 E5RJQ4 531 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 H0YCG3 227 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 CLIC1O00299 241 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 ZNF263O14978 683 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 CEP104O60308 925 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 TLR2O60603 784 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 PRAMEF2O60811 474 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 ATP9AO75110 1047 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 MOSPD3O75425 235 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 STAM2O75886 525 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 FTCDO95954 541 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 MBPP02686 304 aaPredicted RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 TFRCP02786 760 aaKnown RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 PYGLP06737 847 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 H2AFZP0C0S5 128 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 FAM228BP0C875 321 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 TSHRP16473 764 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 YY1P25490 414 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 ANXA13P27216 316 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 RBL1P28749 1068 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 ABCD1P33897 745 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 HOXD13P35453 343 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 STT3AP46977 705 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 LIG4P49917 911 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 MXI1P50539 228 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 ZNF131P52739 623 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 POLGP54098 1239 aaPredicted RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 MFAP3P55082 362 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 SNRPFP62306 86 aaKnown RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 TNNC1P63316 161 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 GPC5P78333 572 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 IRX3P78415 501 aaPredicted RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 CFHR3Q02985 330 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 MTAPQ13126 283 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 SLC14A1Q13336 389 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 MYBPC2Q14324 1141 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 SMC1AQ14683 1233 aaKnown RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 DRAP1Q14919 205 aaPredicted RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 MFSD13AQ14CX5 517 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 RPS6KA1Q15418 735 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 NAB2Q15742 525 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 STXBP2Q15833 593 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 UGCGQ16739 394 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 ASTE1Q2TB18 679 aaPredicted RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 ALKBH5Q6P6C2 394 aaKnown RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 DCDC5Q6ZRR9 648 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 SEPT14Q6ZU15 432 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 H2AFVQ71UI9 128 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 ZNF571Q7Z3V5 609 aaPredicted RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 PEX26Q7Z412 305 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 HAUS6Q7Z4H7 955 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 KLHL7Q8IXQ5 586 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 GPC2Q8N158 579 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 MMGT1Q8N4V1 131 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 C12orf76Q8N812 135 aaPredicted RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 PNPLA1Q8N8W4 532 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 XXYLT1Q8NBI6 393 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 NOA1Q8NC60 698 aaKnown RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 RDM1Q8NG50 284 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 IGFBPL1Q8WX77 278 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 CTNNBL1Q8WYA6 563 aaPredicted RBP2.99□□□□□ -1.93
CALD1-221ENST00000489019 POMGNT1Q8WZA1 660 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 KIFAP3Q92845 792 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 SLC35C1Q96A29 364 aa2.99□□□□□ -1.93
CALD1-221ENST00000489019 SKA1Q96BD8 255 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms