RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 SLAMF8Q9P0V8 285 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 TMEM181Q9P2C4 612 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 EIF2S1P05198 315 aaKnown RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 SPRP35270 261 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 SLC26A2P50443 739 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 SNRPD2P62316 118 aaKnown RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 ILF2Q12905 390 aaKnown RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 FXNQ16595 210 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 INTS11Q5TA45 600 aaKnown RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 ADGRG5Q8IZF4 528 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 RDH11Q8TC12 318 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 APBB2Q92870 758 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 CHST12Q9NRB3 414 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 GABBR1Q9UBS5 961 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 SEPT9Q9UHD8 586 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 ARHGAP33O14559 1287 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 DHX15O43143 795 aaKnown RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 CYP2F1P24903 491 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 CDH13P55290 713 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 RFTN1Q14699 578 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 LAPTM4AQ15012 233 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 HIST2H2ACQ16777 129 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 DGUOKQ16854 277 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 CTU2Q2VPK5 515 aaKnown RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 SOWAHCQ53LP3 525 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 SWSAP1Q6NVH7 229 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 PLD3Q8IV08 490 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 NIPA2Q8N8Q9 360 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 PDPRQ8NCN5 879 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 DNERQ8NFT8 737 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 OR6Q1Q8NGQ2 317 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 MCFD2Q8NI22 146 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 NSUN6Q8TEA1 469 aaKnown RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 BHMTQ93088 406 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 TSNARE1Q96NA8 513 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 TWNKQ96RR1 684 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 UHRF1Q96T88 793 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 DSN1Q9H410 356 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 TRMT13Q9NUP7 481 aaKnown RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 PAK1IP1Q9NWT1 392 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 CCNE2O96020 404 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 LDLRP01130 860 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 POLBP06746 335 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 CYP4B1P13584 511 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 DAB2P98082 770 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 CTBP1Q13363 440 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 FAM160B2Q86V87 743 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 OR10Q1Q8NGQ4 319 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 NUDT8Q8WV74 236 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 FAR1Q8WVX9 515 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 LRRC39Q96DD0 335 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 B3GNT4Q9C0J1 378 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 TLR9Q9NR96 1032 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 SNX6Q9UNH7 406 aa16.18■□□□□ 0.18
MCF2L-229ENST00000488765 ZFC3H1O60293 1989 aaKnown RBP16.18■□□□□ 0.18
MCF2L-229ENST00000488765 NFKBIEO00221 500 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 SCO2O43819 266 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 ICAM1P05362 532 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 TGM2P21980 687 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 KCNA5P22460 613 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 FMO3P31513 532 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 MAGEA3P43357 314 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 ACTR2P61160 394 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 SLC12A1Q13621 1099 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 CDONQ4KMG0 1287 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 STXBP5Q5T5C0 1151 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 NAPEPLDQ6IQ20 393 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 GDPD3Q7L5L3 318 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 SCUBE3Q8IX30 993 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 ZNF280CQ8ND82 737 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 VPS39Q96JC1 886 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 RBBP8Q99708 897 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 POMKQ9H5K3 350 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 NARFLQ9H6Q4 476 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 ARMC1Q9NVT9 282 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 ASNSD1Q9NWL6 643 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 PDE10AQ9Y233 779 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 FAM172BPA6NC97 362 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 CENPBD1B2RD01 187 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 RGS13O14921 159 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 EDN1P05305 212 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 IL12AP29459 219 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 FKBP1AP62942 108 aaKnown RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 CHRNEQ04844 493 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 STRADAQ7RTN6 431 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 RBM23Q86U06 439 aaKnown RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 S100ZQ8WXG8 99 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 TRIB2Q92519 343 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 FYTTD1Q96QD9 318 aaKnown RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 TUBA1CQ9BQE3 449 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 SNRNP25Q9BV90 132 aaKnown RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 B3GNT5Q9BYG0 378 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 POLR3FQ9H1D9 316 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-229ENST00000488765 RNF167Q9H6Y7 350 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 RUBCNLQ9H714 662 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 CMTM6Q9NX76 183 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 ZNF831Q5JPB2 1677 aa16.17■□□□□ 0.18
MCF2L-229ENST00000488765 A0A0X1KG70 313 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms