RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 NLE1Q9NVX2 485 aaPredicted RBP7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 NSMCE4AQ9NXX6 385 aa7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 IL1RAPL1Q9NZN1 696 aa7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 WNT16Q9UBV4 365 aa7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 TBK1Q9UHD2 729 aa7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 PPM1HQ9ULR3 514 aa7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 CA14Q9ULX7 337 aa7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 NDRG2Q9UN36 371 aaKnown RBP7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 MRPS17Q9Y2R5 130 aaKnown RBP7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 KCTD3Q9Y597 815 aa7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 COL4A3Q01955 1670 aa7.57□□□□□ -1.2
APOBEC3A-203ENST00000488758 C5orf42Q9H799 3197 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 IQANK1A0A1B0GTG1 560 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 TSPAN11A1L157 253 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 NPIPB15A6NHN6 443 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 CXorf49A8MYA2 514 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 GOLGA8TH3BQL2 631 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 NEMP1O14524 444 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SLC7A4O43246 635 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 PIAS1O75925 651 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 CLDN7O95471 211 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SYF2O95926 243 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 GOT2P00505 430 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 HOXB2P14652 356 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 KRT15P19012 456 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 CD72P21854 359 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 ITGB7P26010 798 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 HMGCLP35914 325 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SLC19A1P41440 591 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 ARCN1P48444 511 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 PSMD8P48556 350 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SERPINB9P50453 376 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SUOXP51687 545 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 NEK3P51956 506 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 ZNF140P52738 457 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SATB1Q01826 763 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SEMG2Q02383 582 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 ELP6Q0PNE2 266 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SFSWAPQ12872 951 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 LRRC32Q14392 662 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 PTPRCAPQ14761 206 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 RASA2Q15283 850 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 TMED2Q15363 201 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SMAD1Q15797 465 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 HSF5Q4G112 596 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 FASTKD1Q53R41 847 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 TMEM31Q5JXX7 168 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 GRTP1Q5TC63 336 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 AGBL2Q5U5Z8 902 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 ZNF776Q68DI1 518 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 NEPROQ6NW34 567 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 AFTPHQ6ULP2 937 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 ERN2Q76MJ5 926 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 MARK2Q7KZI7 788 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 PARS2Q7L3T8 475 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 PTAR1Q7Z6K3 402 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 STRA8Q7Z7C7 330 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SDCCAG8Q86SQ7 713 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 TDRPQ86YL5 185 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 LMNTD2Q8IXW0 634 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 UNC5BQ8IZJ1 945 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 CNPY4Q8N129 248 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 TTC30BQ8N4P2 665 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 OR13J1Q8NGT2 312 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 OR4L1Q8NH43 312 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 RPLP0P6Q8NHW5 317 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 GANCQ8TET4 914 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SLC44A1Q8WWI5 657 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 RAB7BQ96AH8 199 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 PBXIP1Q96AQ6 731 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 VOPP1Q96AW1 172 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 ARRDC3Q96B67 414 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 DNAJC1Q96KC8 554 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 MCCC1Q96RQ3 725 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 NELL2Q99435 816 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 PAFAH2Q99487 392 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 GABRG3Q99928 467 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SH3GL2Q99962 352 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 USB1Q9BQ65 265 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 RSPH9Q9H1X1 276 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 MFSD1Q9H3U5 465 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 LMAN1LQ9HAT1 526 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 PCDH12Q9NPG4 1184 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 C11orf16Q9NQ32 467 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 ARHGEF3Q9NR81 526 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SMYD2Q9NRG4 433 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 IL17CQ9P0M4 197 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 PSMC3IPQ9P2W1 217 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 B4GALT6Q9UBX8 382 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SARDHQ9UL12 918 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 NOVA2Q9UNW9 492 aaKnown RBP7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 SLC30A1Q9Y6M5 507 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 F5P12259 2224 aa7.56□□□□□ -1.2
APOBEC3A-203ENST00000488758 ATG2BQ96BY7 2078 aa7.55□□□□□ -1.2
APOBEC3A-203ENST00000488758 A0A0U1RQS6 177 aa7.55□□□□□ -1.2
APOBEC3A-203ENST00000488758 CCDC162PA2VCL2 907 aa7.55□□□□□ -1.2
APOBEC3A-203ENST00000488758 HMGB1P1B2RPK0 211 aaPredicted RBP7.55□□□□□ -1.2
APOBEC3A-203ENST00000488758 CCL22O00626 93 aa7.55□□□□□ -1.2
APOBEC3A-203ENST00000488758 PFDN6O15212 129 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms