RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 YAF2Q8IY57 180 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 GPR150Q8NGU9 434 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 PDCD6IPQ8WUM4 868 aaKnown RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 SCG3Q8WXD2 468 aaKnown RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 FAM3CQ92520 227 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 DNAJC1Q96KC8 554 aaKnown RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 RPL10LQ96L21 214 aaKnown RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 FAM83CQ9BQN1 747 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 NSRP1Q9H0G5 558 aaKnown RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 HPS4Q9NQG7 708 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 SNX15Q9NRS6 342 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 THG1LQ9NWX6 298 aaKnown RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 SLC17A7Q9P2U7 560 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 DCDC2Q9UHG0 476 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 EVLQ9UI08 416 aaPredicted RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 SLC27A6Q9Y2P4 619 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 MTO1Q9Y2Z2 717 aaKnown RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 PCDHB9Q9Y5E1 797 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 TRAFD1O14545 582 aaPredicted RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 ASLP04424 464 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 GSTA1P08263 222 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 CHRNB1P11230 501 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 ARSAP15289 507 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 LPOP22079 712 aaPredicted RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 GABRB3P28472 473 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 DGKGP49619 791 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 ARSDP51689 593 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 CTBP1Q13363 440 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 PDE1CQ14123 709 aaPredicted RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 PDGFRLQ15198 375 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 KYAT3Q6YP21 454 aaKnown RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 CDHR3Q6ZTQ4 885 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 CPLX4Q7Z7G2 160 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 CILP2Q8IUL8 1156 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 OR6P1Q8NGX9 317 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 ZNF473Q8WTR7 871 aaKnown RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 FAM111AQ96PZ2 611 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 C19orf43Q9BQ61 176 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 CPEB1Q9BZB8 566 aaKnown RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 OSBPL6Q9BZF3 934 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 SLC13A1Q9BZW2 595 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 TNKS2Q9H2K2 1166 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 EBF3Q9H4W6 596 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 LMAN1LQ9HAT1 526 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 MAGEE1Q9HCI5 957 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 FBRSL1Q9HCM7 1045 aaKnown RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 SPATA6Q9NWH7 488 aaPredicted RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 GRID1Q9ULK0 1009 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 KCTD3Q9Y597 815 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 SPTBN4Q9H254 2564 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 ZNF292O60281 2723 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 TCP11X1B4DZS4 312 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 PROB1E7EW31 1015 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 GFRA3O60609 400 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 VIMP08670 466 aaKnown RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 CISD3P0C7P0 127 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 OGNP20774 298 aaKnown RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 LEPRP48357 1165 aaKnown RBP12.72□□□□□ -0.37
NELFE-209ENST00000488426 CSRP3P50461 194 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 MPP1Q00013 466 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 RAD51Q06609 339 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 MYLK3Q32MK0 819 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 MRNIPQ6NTE8 343 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 LCA5Q86VQ0 697 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 CAMK1DQ8IU85 385 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 LRRC34Q8IZ02 419 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 TTC30BQ8N4P2 665 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 NAT16Q8N8M0 369 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 MDGA1Q8NFP4 955 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 OR13C4Q8NGS5 318 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 PIH1D2Q8WWB5 315 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 ATXN7L3BQ96GX2 97 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 TBATAQ96M53 351 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
NELFE-209ENST00000488426 SDK1Q7Z5N4 2213 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 A0A1W2PQ67 120 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 CCDC162PA2VCL2 907 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 ANTXRLA6NF34 631 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 SPECC1L-ADORA2AF8WAN1 911 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 POP4O95707 220 aaKnown RBP12.71□□□□□ -0.37
NELFE-209ENST00000488426 GOT2P00505 430 aaKnown RBP12.71□□□□□ -0.37
NELFE-209ENST00000488426 ATP5BP06576 529 aaKnown RBP12.71□□□□□ -0.37
NELFE-209ENST00000488426 SRPRAP08240 638 aaKnown RBP12.71□□□□□ -0.37
NELFE-209ENST00000488426 TAC1P20366 129 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 FOXN2P32314 431 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 CTHP32929 405 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 NNMTP40261 264 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 DLG2Q15700 870 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 DBN1Q16643 649 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 GEN1Q17RS7 908 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 ACCSLQ4AC99 568 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 CARD16Q5EG05 197 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 TMEM215Q68D42 235 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 AFTPHQ6ULP2 937 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 Q6ZS52 159 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 PTAR1Q7Z6K3 402 aaPredicted RBP12.71□□□□□ -0.37
NELFE-209ENST00000488426 ETFBKMTQ8IXQ9 262 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 RYBPQ8N488 228 aaPredicted RBP12.71□□□□□ -0.37
NELFE-209ENST00000488426 OTUD6BQ8N6M0 293 aa12.71□□□□□ -0.37
NELFE-209ENST00000488426 OR4K2Q8NGD2 314 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms