RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 LRCH2Q5VUJ6 765 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 SNX30Q5VWJ9 437 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 TTI2Q6NXR4 508 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 CFAP161Q6P656 301 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 CYP20A1Q6UW02 462 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 NEXN-AS1Q8NBZ9 246 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 ELP5Q8TE02 316 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 TMED6Q8WW62 240 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 POMGNT1Q8WZA1 660 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 WASF1Q92558 559 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 ARHGEF2Q92974 986 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 MTBPQ96DY7 904 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 MMABQ96EY8 250 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 PERPQ96FX8 193 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 THOC3Q96J01 351 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 ZNF479Q96JC4 524 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 SLC41A2Q96JW4 573 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 LYZL4Q96KX0 146 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 TMEM68Q96MH6 324 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 TMEM47Q9BQJ4 181 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 STRA6Q9BX79 667 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 SYNCQ9H7C4 482 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 SLC28A3Q9HAS3 691 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 SCPEP1Q9HB40 452 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 MKKSQ9NPJ1 570 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 HINT3Q9NQE9 182 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 CNGB3Q9NQW8 809 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 RRP7BPQ9NSQ0 103 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 CORO1CQ9ULV4 474 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 SLC45A1Q9Y2W3 748 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 CEPT1Q9Y6K0 416 aa3.92□□□□□ -1.78
ECHDC1-217ENST00000488087 INSRP06213 1382 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 CCNB3Q8WWL7 1395 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 FAM237AA0A1B0GTK4 181 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 DYNC1I1O14576 645 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 WNT9BO14905 357 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 TIMM44O43615 452 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 FRAT2O75474 233 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 MLYCDO95822 493 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 EIF2S1P05198 315 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 ALOX12P18054 663 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 HNRNPH1P31943 449 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 THBS3P49746 956 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 FOXG1P55316 489 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 RIPK4P57078 832 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 LTBQ06643 244 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 DDR1Q08345 913 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 KCTD2Q14681 263 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 EIF2S3LQ2VIR3 472 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 USP41Q3LFD5 358 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 XKR9Q5GH70 373 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 PPP6R3Q5H9R7 873 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 CXorf66Q5JRM2 361 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 ANKRD54Q6NXT1 300 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 METTL2BQ6P1Q9 378 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 IKBIPQ70UQ0 350 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 MTSS1LQ765P7 747 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 ZDHHC17Q8IUH5 632 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 SAMD14Q8IZD0 417 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 TRIM44Q96DX7 344 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 PHF21BQ96EK2 531 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 METTL2AQ96IZ6 378 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 HARBI1Q96MB7 349 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 WDFY2Q96P53 400 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 BARD1Q99728 777 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 FAM110AQ9BQ89 295 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 SDF4Q9BRK5 362 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 HIPK2Q9H2X6 1198 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 CHMP4BQ9H444 224 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 POLR1BQ9H9Y6 1135 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 BAZ1AQ9NRL2 1556 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 HCFC1R1Q9NWW0 138 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 OCIAD1Q9NX40 245 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 CNTLNQ9NXG0 1405 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 ABI3Q9P2A4 366 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 SLC9A2Q9UBY0 812 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 SNX9Q9Y5X1 595 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 MAU2Q9Y6X3 613 aa3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 ATXN2Q99700 1313 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-217ENST00000488087 ERICH3Q5RHP9 1530 aa3.9□□□□□ -1.78
ECHDC1-217ENST00000488087 ZMYM4Q5VZL5 1548 aa3.9□□□□□ -1.78
ECHDC1-217ENST00000488087 IBTKQ9P2D0 1353 aaPredicted RBP3.9□□□□□ -1.78
ECHDC1-217ENST00000488087 SETD5Q9C0A6 1442 aa3.9□□□□□ -1.78
ECHDC1-217ENST00000488087 VCYO14598 125 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 AP3D1O14617 1153 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 CLGNO14967 610 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 SMAD6O43541 496 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 SLC25A12O75746 678 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 METAP2P50579 478 aaKnown RBP eCLIP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 NANOS2P60321 138 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 PRAMEP78395 509 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 DHX34Q14147 1143 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 EFNB3Q15768 340 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 GGNBP1Q5YKI7 109 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 ZNF280DQ6N043 979 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 TMEM154Q6P9G4 183 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 NCEH1Q6PIU2 408 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 SARM1Q6SZW1 724 aa3.9□□□□□ -1.79
ECHDC1-217ENST00000488087 SLC36A4Q6YBV0 504 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms