RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 MAOAP21397 527 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 BDKRB2P30411 391 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 GNL1P36915 607 aaPredicted RBP4.04□□□□□ -1.76
SMC4-219ENST00000487747 DVL1P1P54792 670 aaPredicted RBP4.04□□□□□ -1.76
SMC4-219ENST00000487747 LINGO2Q7L985 606 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 USP38Q8NB14 1042 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 OR10V1Q8NGI7 309 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 LRRC1Q9BTT6 524 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 POLR3CQ9BUI4 534 aaPredicted RBP4.04□□□□□ -1.76
SMC4-219ENST00000487747 BARHL1Q9BZE3 327 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 PPP1R3EQ9H7J1 279 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 GPR108Q9NPR9 543 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.04□□□□□ -1.76
SMC4-219ENST00000487747 HSPB7Q9UBY9 170 aa4.04□□□□□ -1.76
SMC4-219ENST00000487747 IGKV3D-20A0A0C4DH25 116 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 hCG_1642624A0A1W2PR95 340 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 EXTL3O43909 919 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 TACC1O75410 805 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 MT-CYBP00156 380 aaPredicted RBP4.03□□□□□ -1.76
SMC4-219ENST00000487747 TUBBP07437 444 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 GALTP07902 379 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 TRAPPC10P48553 1259 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 METAP2P50579 478 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMC4-219ENST00000487747 TUBB4BP68371 445 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 EFNB1P98172 346 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 SLC12A1Q13621 1099 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 ZNF876PQ49A33 203 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 WDR45BQ5MNZ6 344 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 TRNP1Q6NT89 227 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 RAD9BQ6WBX8 426 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 SPATA6LQ8N4H0 392 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 SPEM1Q8N4L4 309 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 HMGCLL1Q8TB92 370 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 MAGEC3Q8TD91 643 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 LGALS12Q96DT0 336 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 MTERF1Q99551 399 aaKnown RBP4.03□□□□□ -1.76
SMC4-219ENST00000487747 SYT17Q9BSW7 474 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 GLIS2Q9BZE0 524 aaPredicted RBP4.03□□□□□ -1.76
SMC4-219ENST00000487747 CACNA1FO60840 1977 aa4.03□□□□□ -1.76
SMC4-219ENST00000487747 PAX1P15863 534 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 POU1F1P28069 291 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 PDE1BQ01064 536 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 GTF2H2Q13888 395 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 KRT72Q14CN4 511 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 TCTN1Q2MV58 587 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 GTF2H2CQ6P1K8 395 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 CEACAM20Q6UY09 585 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 TMTC1Q8IUR5 882 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 HUS1BQ8NHY5 278 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 MOV10L1Q9BXT6 1211 aaKnown RBP4.02□□□□□ -1.77
SMC4-219ENST00000487747 BPIFA1Q9NP55 256 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 FAM96BQ9Y3D0 163 aa4.02□□□□□ -1.77
SMC4-219ENST00000487747 CTAGE9A4FU28 777 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 GOLGA6L9A6NEM1 432 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 TEX22C9J3V5 150 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 CTAGE8P0CG41 777 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 DCTP40126 519 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 PMP22Q01453 160 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 PPIGQ13427 754 aaKnown RBP eCLIP4.01□□□□□ -1.772e-27■■■■■ 81.9
SMC4-219ENST00000487747 PDCD2Q16342 344 aaPredicted RBP4.01□□□□□ -1.77
SMC4-219ENST00000487747 KRT24Q2M2I5 525 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 SIRPB2Q5JXA9 342 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 PDSS1Q5T2R2 415 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 ZNF280DQ6N043 979 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 KCTD18Q6PI47 426 aaPredicted RBP4.01□□□□□ -1.77
SMC4-219ENST00000487747 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 CTAGE4Q8IX94 777 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 SRBD1Q8N5C6 995 aaKnown RBP4.01□□□□□ -1.77
SMC4-219ENST00000487747 MAPK1IP1LQ8NDC0 245 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 ANKRD9Q96BM1 317 aaPredicted RBP4.01□□□□□ -1.77
SMC4-219ENST00000487747 RHBDF1Q96CC6 855 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 C17orf77Q96MU5 243 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 NDST4Q9H3R1 872 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 HINT3Q9NQE9 182 aaKnown RBP4.01□□□□□ -1.77
SMC4-219ENST00000487747 C20orf141Q9NUB4 165 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 HSF4Q9ULV5 492 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 DLGAP4Q9Y2H0 992 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 LOXL2Q9Y4K0 774 aa4.01□□□□□ -1.77
SMC4-219ENST00000487747 WDR1O75083 606 aa4□□□□□ -1.77
SMC4-219ENST00000487747 FTCDO95954 541 aa4□□□□□ -1.77
SMC4-219ENST00000487747 GRK6P43250 576 aa4□□□□□ -1.77
SMC4-219ENST00000487747 PAPOLAP51003 745 aaKnown RBP4□□□□□ -1.77
SMC4-219ENST00000487747 HSD17B4P51659 736 aa4□□□□□ -1.77
SMC4-219ENST00000487747 SORDQ00796 357 aa4□□□□□ -1.77
SMC4-219ENST00000487747 PPP2R5BQ15173 497 aa4□□□□□ -1.77
SMC4-219ENST00000487747 RNPS1Q15287 305 aaKnown RBP4□□□□□ -1.77
SMC4-219ENST00000487747 C10orf62Q5T681 223 aaPredicted RBP4□□□□□ -1.77
SMC4-219ENST00000487747 TXNDC8Q6A555 127 aa4□□□□□ -1.77
SMC4-219ENST00000487747 SLC35E4Q6ICL7 350 aa4□□□□□ -1.77
SMC4-219ENST00000487747 DUS1LQ6P1R4 473 aaKnown RBP4□□□□□ -1.77
SMC4-219ENST00000487747 TMEM81Q6P7N7 255 aa4□□□□□ -1.77
SMC4-219ENST00000487747 FAM171BQ6P995 826 aa4□□□□□ -1.77
SMC4-219ENST00000487747 CPLX2Q6PUV4 134 aaKnown RBP4□□□□□ -1.77
SMC4-219ENST00000487747 QSOX2Q6ZRP7 698 aa4□□□□□ -1.77
SMC4-219ENST00000487747 SAMD3Q8N6K7 520 aa4□□□□□ -1.77
SMC4-219ENST00000487747 ENAHQ8N8S7 591 aaPredicted RBP4□□□□□ -1.77
SMC4-219ENST00000487747 TNIP2Q8NFZ5 429 aa4□□□□□ -1.77
SMC4-219ENST00000487747 OR5R1Q8NH85 324 aa4□□□□□ -1.77
SMC4-219ENST00000487747 PABPC5Q96DU9 382 aaKnown RBP4□□□□□ -1.77
SMC4-219ENST00000487747 ST6GAL2Q96JF0 529 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms