RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PITPNM3Q9BZ71 974 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 GPR63Q9BZJ6 419 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 PLA2G2FQ9BZM2 168 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 CIPCQ9C0C6 399 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 TLK1Q9UKI8 766 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 PHTF1Q9UMS5 762 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 ACOT9Q9Y305 439 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 TICRRQ7Z2Z1 1910 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 A0A087X1B8 175 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 C1orf232A0A0U1RR37 186 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 A0A1W2PQ67 120 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 TSPAN11A1L157 253 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 PRRT4C9JH25 899 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 EBAG9O00559 213 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 GAPDHSO14556 408 aaPredicted RBP9.43□□□□□ -0.9
SF3B1-211ENST00000487698 BNIP3LO60238 219 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 UGT2B4P06133 528 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 SAT1P21673 171 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 FDXRP22570 491 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 SP100P23497 879 aaPredicted RBP9.43□□□□□ -0.9
SF3B1-211ENST00000487698 MC4RP32245 332 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 LTBRP36941 435 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 CDKN2DP55273 166 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 TIAL1Q01085 375 aaKnown RBP eCLIP9.43□□□□□ -0.91e-7■■■■■ 62.8
SF3B1-211ENST00000487698 DLG1Q12959 904 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 GRAMD4Q6IC98 578 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 FAM45BPQ6NSW5 357 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 CES5AQ6NT32 575 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 PSAPL1Q6NUJ1 521 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 C6orf89Q6UWU4 347 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 RAPH1Q70E73 1250 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 OTOAQ7RTW8 1153 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 SPATA21Q7Z572 469 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 SDCCAG8Q86SQ7 713 aaPredicted RBP9.43□□□□□ -0.9
SF3B1-211ENST00000487698 TRIM42Q8IWZ5 723 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 PIANPQ8IYJ0 282 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 KDM1BQ8NB78 822 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 FAM45AQ8TCE6 357 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 GRIN3AQ8TCU5 1115 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 KCTD4Q8WVF5 259 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 ELSPBP1Q96BH3 223 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 SCRN2Q96FV2 425 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 TSPAN17Q96FV3 270 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 ZFYVE1Q9HBF4 777 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 BPIFA1Q9NP55 256 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 ELOVL2Q9NXB9 296 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 COPG2Q9UBF2 871 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 PKP3Q9Y446 797 aa9.43□□□□□ -0.9
SF3B1-211ENST00000487698 COL4A2P08572 1712 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 PIKFYVEQ9Y2I7 2098 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 G3V2L1 256 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 SNNO75324 88 aaPredicted RBP9.42□□□□□ -0.9
SF3B1-211ENST00000487698 SBK3P0C264 359 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 FGF3P11487 239 aaPredicted RBP9.42□□□□□ -0.9
SF3B1-211ENST00000487698 LAMP2P13473 410 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 ALDH3A1P30838 453 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 NNMTP40261 264 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 OPRD1P41143 372 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 RECQLP46063 649 aaPredicted RBP9.42□□□□□ -0.9
SF3B1-211ENST00000487698 SUOXP51687 545 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 ITIH4Q14624 930 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 EIF4HQ15056 248 aaKnown RBP9.42□□□□□ -0.9
SF3B1-211ENST00000487698 GDPD4Q6W3E5 623 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 TPRG1Q6ZUI0 275 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 CCDC91Q7Z6B0 441 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 NUDCD3Q8IVD9 361 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 CPA6Q8N4T0 437 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 CCDC197Q8NCU1 140 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 OR6Y1Q8NGX8 325 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 CHFRQ96EP1 664 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 MSLNLQ96KJ4 702 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 UBXN10Q96LJ8 280 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 KXD1Q9BQD3 176 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 HEPHQ9BQS7 1158 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 NMRAL1Q9HBL8 299 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 DEC1Q9P2X7 70 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 CRYL1Q9Y2S2 319 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 VWA7Q9Y334 891 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 USP15Q9Y4E8 981 aaPredicted RBP9.42□□□□□ -0.9
SF3B1-211ENST00000487698 LRRK1Q38SD2 2015 aa9.42□□□□□ -0.9
SF3B1-211ENST00000487698 CKAP5Q14008 2032 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 TARM1B6A8C7 271 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 ARNTLO00327 626 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 KLHL2O95198 593 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CLDN7O95471 211 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 APOA4P06727 396 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CTSLP07711 333 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 PSMC3P17980 439 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 LHCGRP22888 699 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 PMLP29590 882 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 SLC26A3P40879 764 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CDKN1CP49918 316 aaPredicted RBP9.41□□□□□ -0.9
SF3B1-211ENST00000487698 SLC12A2P55011 1212 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 IRX4P78413 519 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 OCRLQ01968 901 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 KDSRQ06136 332 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 CACNG1Q06432 222 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 BST1Q10588 318 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 RUNX3Q13761 415 aa9.41□□□□□ -0.9
SF3B1-211ENST00000487698 GRM2Q14416 872 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms