RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 HTRA2O43464 458 aaPredicted RBP8.54□□□□□ -1.04
PRKCB-208ENST00000487674 PRAMEF10O60809 474 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 LRCH4O75427 683 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 HEXIM1O94992 359 aaKnown RBP8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CPNE6O95741 557 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CPP00450 1065 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 ITGB2P05107 769 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 GZMAP12544 262 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CCNB1P14635 433 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 ITIH1P19827 911 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CR2P20023 1033 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CD82P27701 267 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 VIPR1P32241 457 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 SLC10A7Q0GE19 358 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 ILF3Q12906 894 aaKnown RBP eCLIP8.54□□□□□ -1.04
PRKCB-208ENST00000487674 NR1D2Q14995 579 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 TGIF1Q15583 401 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 ASIC2Q16515 512 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 DPYSL2Q16555 572 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CLPPQ16740 277 aaPredicted RBP8.54□□□□□ -1.04
PRKCB-208ENST00000487674 PHF19Q5T6S3 580 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 XKR5Q6UX68 686 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 USP53Q70EK8 1073 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 ZNF438Q7Z4V0 828 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 HEATR4Q86WZ0 1026 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 SFTPA2Q8IWL1 248 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 PELI3Q8N2H9 469 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 AOPEPQ8N6M6 819 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CCL4L1Q8NHW4 92 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 GPBAR1Q8TDU6 330 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 ZNF653Q96CK0 615 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 SGF29Q96ES7 293 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 TRIM11Q96F44 468 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 DTD2Q96FN9 168 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 NSMCE3Q96MG7 304 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 GBP4Q96PP9 640 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 NUDCD1Q96RS6 583 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 MGME1Q9BQP7 344 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 TEX101Q9BY14 249 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 GSDMCQ9BYG8 508 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 B3GNT4Q9C0J1 378 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CARS2Q9HA77 564 aaKnown RBP8.54□□□□□ -1.04
PRKCB-208ENST00000487674 TRNAU1APQ9NX07 287 aaKnown RBP8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CWC15Q9P013 229 aaKnown RBP8.54□□□□□ -1.04
PRKCB-208ENST00000487674 SEPT10Q9P0V9 454 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 CNOT8Q9UFF9 292 aaKnown RBP8.54□□□□□ -1.04
PRKCB-208ENST00000487674 MOSPD1Q9UJG1 213 aa8.54□□□□□ -1.04
PRKCB-208ENST00000487674 TLN1Q9Y490 2541 aaKnown RBP8.54□□□□□ -1.04
PRKCB-208ENST00000487674 A0A1W2PQC6 194 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 A8MX80 341 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 J3QL48 77 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 HGSO14964 777 aaPredicted RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 ZW10O43264 779 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 EFSO43281 561 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 SLC28A2O43868 658 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 PEX11BO96011 259 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 FTLP02792 175 aaPredicted RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 MYBL1P10243 752 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 CYP2A6P11509 494 aaPredicted RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 SNRPBP14678 240 aaKnown RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 LHCGRP22888 699 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 TEAD1P28347 426 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 PCK1P35558 622 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 ARL4AP40617 200 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 ETV5P41161 510 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 PRKCIP41743 596 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 MAZP56270 477 aaKnown RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 CDK3Q00526 305 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 B4GALNT1Q00973 533 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 RALGPS1Q5JS13 557 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 MANEAQ5SRI9 462 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 TMCO3Q6UWJ1 677 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 USP45Q70EL2 814 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 ZNF571Q7Z3V5 609 aaPredicted RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 TMPRSS9Q7Z410 1059 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 PIM3Q86V86 326 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 C17orf82Q86X59 251 aaPredicted RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 TP53INP2Q8IXH6 220 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 BBS5Q8N3I7 341 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 ATPAF2Q8N5M1 289 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 ZDHHC1Q8WTX9 485 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 PDCD6IPQ8WUM4 868 aaKnown RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 MCCC1Q96RQ3 725 aaPredicted RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 FRMD8Q9BZ67 464 aaPredicted RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 NAT10Q9H0A0 1025 aaKnown RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 SEMA6CQ9H3T2 930 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 HAUS4Q9H6D7 363 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 MRPL47Q9HD33 250 aaKnown RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 ATP13A2Q9NQ11 1180 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 AIPL1Q9NZN9 384 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 FOXJ2Q9P0K8 574 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 AKAP7Q9P0M2 348 aaPredicted RBP8.53□□□□□ -1.04
PRKCB-208ENST00000487674 TAAR2Q9P1P5 351 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 PHTF1Q9UMS5 762 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 PCDHB11Q9Y5F2 797 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 PCDHGC4Q9Y5F7 938 aa8.53□□□□□ -1.04
PRKCB-208ENST00000487674 SDK2Q58EX2 2172 aa8.52□□□□□ -1.04
PRKCB-208ENST00000487674 NPIPB15A6NHN6 443 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms