RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SRSF8Q9BRL6 282 aaKnown RBP5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 SIRT3Q9NTG7 399 aaPredicted RBP5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 CISD1Q9NZ45 108 aaKnown RBP5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 NENFQ9UMX5 172 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 BTBD3Q9Y2F9 522 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 RAI2Q9Y5P3 530 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 HS3ST3B1Q9Y662 390 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 PREX2Q70Z35 1606 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 PLA2R1Q13018 1463 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 P4HA2O15460 535 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 HCRTR2O43614 444 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 LDB2O43679 373 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 HSPA1LP34931 641 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 THPOP40225 353 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 EIF2DP41214 584 aaKnown RBP5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 ME1P48163 572 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 RASSF2P50749 326 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 KRT24Q2M2I5 525 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 CDONQ4KMG0 1287 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 DCAF6Q58WW2 860 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 DCAF12L2Q5VW00 463 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 TMCO3Q6UWJ1 677 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 LINGO2Q7L985 606 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 TRAPPC11Q7Z392 1133 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 CTU1Q7Z7A3 348 aaKnown RBP5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 PATL1Q86TB9 770 aaKnown RBP5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 WDR63Q8IWG1 891 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 TEX11Q8IYF3 940 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 MMP21Q8N119 569 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 TMEM199Q8N511 208 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 ARFGAP1Q8N6T3 406 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 MPLKIPQ8TAP9 179 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 ARRDC2Q8TBH0 407 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 TMEM163Q8TC26 289 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 SGCDQ92629 289 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 ERGIC1Q969X5 290 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 JAKMIP2Q96AA8 810 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 VCPIP1Q96JH7 1222 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 CRAMP1Q96RY5 1269 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 TMEM47Q9BQJ4 181 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 SLC28A3Q9HAS3 691 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 PDE7BQ9NP56 450 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 MAU2Q9Y6X3 613 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 STRCP1A6NGW2 1772 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 CDC42BPAQ5VT25 1732 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 NEURL4Q96JN8 1562 aa5.08□□□□□ -1.6
PRPF38A-203ENST00000487160 TCOF1Q13428 1488 aaKnown RBP5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 ZNF804BA4D1E1 1349 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 C1orf226A1L170 272 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 TMEM202A6NGA9 273 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 I6L893 689 aaPredicted RBP5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 HS6ST1O60243 411 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 PLOD3O60568 738 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 ERAL1O75616 437 aaKnown RBP5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 FGF2P09038 288 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 TMEM11P17152 192 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 PIGAP37287 484 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 MRPL12P52815 198 aaKnown RBP5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 SRSF1Q07955 248 aaKnown RBP eCLIP5.07□□□□□ -1.63e-9■□□□□ 8.4
PRPF38A-203ENST00000487160 IKQ13123 557 aaPredicted RBP5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 MYBPC2Q14324 1141 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 PTGR1Q14914 329 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 RABEP1Q15276 862 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 NAB2Q15742 525 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 ZNF284Q2VY69 593 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 ODF3L2Q3SX64 289 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 SYCE2Q6PIF2 218 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 MON1BQ7L1V2 547 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 ZNF367Q7RTV3 350 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 SRRM1Q8IYB3 904 aaKnown RBP5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 LPAR1Q92633 364 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 IGSF8Q969P0 613 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 SAT2Q96F10 170 aaPredicted RBP5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 APOLD1Q96LR9 279 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 OR2A14Q96R47 310 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 SLF1Q9BQI6 1058 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 SPRTNQ9H040 489 aaPredicted RBP5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 GPR108Q9NPR9 543 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 SETD4Q9NVD3 440 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 OGFRQ9NZT2 677 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 ERVK-11Q9UQG0 969 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 DNMT1P26358 1616 aaKnown RBP5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 CPS1P31327 1500 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 ABCC1P33527 1531 aa5.07□□□□□ -1.6
PRPF38A-203ENST00000487160 NPATQ14207 1427 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 CNTLNQ9NXG0 1405 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 PASKQ96RG2 1323 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 RNF17Q9BXT8 1623 aaKnown RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 KDM4EB2RXH2 506 aaPredicted RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 AKR1B15C9JRZ8 316 aaPredicted RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 H0YGN5 161 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 CTDSP2O14595 271 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 TCERG1O14776 1098 aaKnown RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 ENTPD3O75355 529 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 NDUFB4O95168 129 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 TUBBP07437 444 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 ADRB2P07550 413 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 ARSBP15848 533 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 TNFRSF1BP20333 461 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 GNLYP22749 145 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms