RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SH3KBP1Q96B97 665 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 C18orf8Q96DM3 657 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 C5orf34Q96MH7 638 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 SLC25A23Q9BV35 468 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 LGR4Q9BXB1 951 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 EPB41L1Q9H4G0 881 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 APMAPQ9HDC9 416 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 SLAMF7Q9NQ25 335 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 PDP2Q9P2J9 529 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 RCOR3Q9P2K3 495 aaPredicted RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 LHX3Q9UBR4 397 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 UBA2Q9UBT2 640 aaPredicted RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 CROTQ9UKG9 612 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 SUFUQ9UMX1 484 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 NAV3Q8IVL0 2385 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 GOLGA6CA6NDK9 693 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 GOLGA6BA6NDN3 693 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 TCP11X1B4DZS4 312 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 RASA4BC9J798 803 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 GOLGA8SH3BPF8 625 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 RASA4O43374 803 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 DPM1O60762 260 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 KATNA1O75449 491 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 CREG1O75629 220 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 LRIG2O94898 1065 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 CEACAM5P06731 702 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 GOLGA6DP0CG33 693 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 SLC2A4P14672 509 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 SDC4P31431 198 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 LEPRP48357 1165 aaKnown RBP7.63□□□□□ -1.19
PDPN-205ENST00000487038 EPHA4P54764 986 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 BPIFB4P59827 614 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 ATP11AP98196 1134 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 HHEXQ03014 270 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 BCL2L1Q07817 233 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 FOXM1Q08050 763 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 RALGDSQ12967 914 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 SEMA5AQ13591 1074 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 LRP8Q14114 963 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 ELOAQ14241 798 aaKnown RBP7.63□□□□□ -1.19
PDPN-205ENST00000487038 INPP5JQ15735 1006 aaPredicted RBP7.63□□□□□ -1.19
PDPN-205ENST00000487038 CHRNA6Q15825 494 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 ARTNQ5T4W7 220 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 RAET1GQ6H3X3 334 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 LIPIQ6XZB0 460 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 XYLT1Q86Y38 959 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 RASGRP3Q8IV61 690 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 RTL3Q8N8U3 475 aaKnown RBP7.63□□□□□ -1.19
PDPN-205ENST00000487038 AVL9Q8NBF6 648 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 TTC13Q8NBP0 860 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 THAP4Q8WY91 577 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 SHC3Q92529 594 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 NCSTNQ92542 709 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 OR2M4Q96R27 311 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 TEX101Q9BY14 249 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.63□□□□□ -1.19
PDPN-205ENST00000487038 FRMD8Q9BZ67 464 aaPredicted RBP7.63□□□□□ -1.19
PDPN-205ENST00000487038 SCAND2PQ9GZW5 306 aaPredicted RBP7.63□□□□□ -1.19
PDPN-205ENST00000487038 ZNF768Q9H5H4 540 aaKnown RBP7.63□□□□□ -1.19
PDPN-205ENST00000487038 CATSPERBQ9H7T0 1116 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 PLCB1Q9NQ66 1216 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 ACSS2Q9NR19 701 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 GOLGA6AQ9NYA3 693 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 KLHL3Q9UH77 587 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 SLC5A6Q9Y289 635 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 ZNF451Q9Y4E5 1061 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 PCDHGB7Q9Y5F8 929 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 PCDHGA9Q9Y5G4 932 aaKnown RBP7.63□□□□□ -1.19
PDPN-205ENST00000487038 PCDHGA6Q9Y5G7 932 aa7.63□□□□□ -1.19
PDPN-205ENST00000487038 A0A1W2PQ67 120 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 PIPSLA2A3N6 862 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 WIPF3A6NGB9 483 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 C21orf140B9A014 251 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 HNRNPRO43390 633 aaKnown RBP7.62□□□□□ -1.19
PDPN-205ENST00000487038 FGFR1OPO95684 399 aaKnown RBP7.62□□□□□ -1.19
PDPN-205ENST00000487038 LDLRP01130 860 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 PDGFAP04085 211 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 IVLP07476 585 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 FURINP09958 794 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 ANKRD34CP0C6C1 535 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 F8A1P23610 371 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 EPHB2P29323 1055 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 CDH5P33151 784 aaPredicted RBP7.62□□□□□ -1.19
PDPN-205ENST00000487038 ADRA1BP35368 520 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 ADCY8P40145 1251 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 GARSP41250 739 aaKnown RBP7.62□□□□□ -1.19
PDPN-205ENST00000487038 MAPK9P45984 424 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 CSNK1DP48730 415 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 CDK3Q00526 305 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 MRPL49Q13405 166 aaKnown RBP7.62□□□□□ -1.19
PDPN-205ENST00000487038 NADK2Q4G0N4 442 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 AFMIDQ63HM1 303 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 KLHL10Q6JEL2 608 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 GJB7Q6PEY0 223 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 GBP6Q6ZN66 633 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 STRADAQ7RTN6 431 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 ZNF761Q86XN6 746 aaPredicted RBP7.62□□□□□ -1.19
PDPN-205ENST00000487038 CAMK1DQ8IU85 385 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 PLXDC1Q8IUK5 500 aa7.62□□□□□ -1.19
PDPN-205ENST00000487038 HSCBQ8IWL3 235 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms