RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 WBP1Q96G27 269 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 CALML4Q96GE6 196 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 PGAM5Q96HS1 289 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 SLC41A2Q96JW4 573 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 NCAPGQ9BPX3 1015 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 FAM110AQ9BQ89 295 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM47Q9BQJ4 181 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 C1QTNF5Q9BXJ0 243 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 PDZD7Q9H5P4 517 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 RANGRFQ9HD47 186 aaPredicted RBP3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 KRCC1Q9NPI7 259 aaPredicted RBP3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 CISD1Q9NZ45 108 aaKnown RBP3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 CEPT1Q9Y6K0 416 aa3.62□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM202A6NGA9 273 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 KDM4EB2RXH2 506 aaPredicted RBP3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 TIMM44O43615 452 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 IGKV3-20P01619 116 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 CYP1A2P05177 515 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 CLTBP09497 229 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 THPOP40225 353 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 RAD52P43351 418 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 SNX16P57768 344 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 SORDQ00796 357 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 NAE1Q13564 534 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 GPR18Q14330 331 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 ADIPOQQ15848 244 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 ZNF284Q2VY69 593 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 ODF3L2Q3SX64 289 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 JADE1Q6IE81 842 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 PLEKHA7Q6IQ23 1121 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 MON1BQ7L1V2 547 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 ENOSF1Q7L5Y1 443 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 CTU1Q7Z7A3 348 aaKnown RBP3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 HAPLN4Q86UW8 402 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 NR2C2APQ86WQ0 139 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 WDR63Q8IWG1 891 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 TEX11Q8IYF3 940 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 C17orf53Q8N3J3 647 aaPredicted RBP3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 C1orf131Q8NDD1 294 aaKnown RBP3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 ARRDC2Q8TBH0 407 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM255BQ8WV15 326 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 SNRNP27Q8WVK2 155 aaKnown RBP3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 ERGIC1Q969X5 290 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 APOLD1Q96LR9 279 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM204Q9BSN7 226 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 MAK16Q9BXY0 300 aaKnown RBP3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 IFIH1Q9BYX4 1025 aaKnown RBP3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM51Q9NW97 253 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 CLIC5Q9NZA1 410 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 ERVK-11Q9UQG0 969 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM5Q9Y2B1 443 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 TTLL3Q9Y4R7 772 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 MAU2Q9Y6X3 613 aa3.61□□□□□ -1.83
SNRNP27-204ENST00000487029 CDRT15L2A8MXV6 281 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 BTBD18B2RXH4 712 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 B4DLN1 442 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 I6L893 689 aaPredicted RBP3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 TMCC2O75069 709 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 GJB3O75712 270 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 RB1P06400 928 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM11P17152 192 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 GPTP24298 496 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 ARRB2P32121 409 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 PIK3CAP42336 1068 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 HILS1P60008 231 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 ZBED6P86452 979 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 TFAP4Q01664 338 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 NUCB1Q02818 461 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 NEDD9Q14511 834 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 IRF3Q14653 427 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 C2orf68Q2NKX9 166 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 ASTE1Q2TB18 679 aaPredicted RBP3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 ZSCAN23Q3MJ62 389 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 SOWAHCQ53LP3 525 aaPredicted RBP3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 RAB41Q5JT25 222 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 CFAP58Q5T655 872 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 OTUD1Q5VV17 481 aaPredicted RBP3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 HIST2H2BCQ6DN03 193 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 HIST2H2BDQ6DRA6 164 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 CAPRIN2Q6IMN6 1127 aaKnown RBP3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 Q6ZSV7 163 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 Q6ZTK2 550 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 SEPT14Q6ZU15 432 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 MTSS1LQ765P7 747 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 ZNF367Q7RTV3 350 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 CCDC13Q8IYE1 715 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 RNF168Q8IYW5 571 aaPredicted RBP3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 TAGAPQ8N103 731 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 AGBL3Q8NEM8 1001 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 TRIB2Q92519 343 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 ZKSCAN4Q969J2 545 aaPredicted RBP3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 CCDC34Q96HJ3 373 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 URB1-AS1Q96HZ7 61 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 FEM1CQ96JP0 617 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 HARBI1Q96MB7 349 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 CLK4Q9HAZ1 481 aaKnown RBP3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 PLAC1Q9HBJ0 212 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 IL36RNQ9UBH0 155 aa3.6□□□□□ -1.83
SNRNP27-204ENST00000487029 POLG2Q9UHN1 485 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms