RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 LRRC40Q9H9A6 602 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 MRPL44Q9H9J2 332 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 WDR6Q9NNW5 1121 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 SARS2Q9NP81 518 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 SLAMF7Q9NQ25 335 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 LZTFL1Q9NQ48 299 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 TMEM184CQ9NVA4 438 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 TRNAU1APQ9NX07 287 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 WWOXQ9NZC7 414 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 NINJ2Q9NZG7 142 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 THEGQ9P2T0 379 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 BAIAP2L1Q9UHR4 511 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 MAD2L2Q9UI95 211 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 DDX19BQ9UMR2 479 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 TBX20Q9UMR3 447 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 CORO2BQ9UQ03 480 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 DERAQ9Y315 318 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 ASB3Q9Y575 518 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 PCDHGA9Q9Y5G4 932 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 PCDHGA8Q9Y5G5 932 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 PCDHGA7Q9Y5G6 932 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 PCDHGA6Q9Y5G7 932 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 PCDHGA3Q9Y5H0 932 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 CYP46A1Q9Y6A2 500 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 COL15A1P39059 1388 aa4.26□□□□□ -1.73
R3HDM1-217ENST00000486532 C15orf38-AP3S2A0A0A6YYH1 394 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 SYCE3A1L190 88 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 HEATR9A2RTY3 570 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 POM121BA6NF01 834 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 H0YIZ8 118 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 H3BQV1 296 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 SMIM22K7EJ46 135 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 VILLO15195 856 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 GUCY1B2O75343 617 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 TACC1O75410 805 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 BCAS2O75934 225 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 TMCC1O94876 653 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 LARGE1O95461 756 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 METTL18O95568 372 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CAVIN2O95810 425 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 OTCP00480 354 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 ASNSP08243 561 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 ALOX5P09917 674 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 FAM86B2P0C5J1 330 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 ATXN1LP0C7T5 689 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 TXNP10599 105 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 MYF5P13349 255 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 PTBP1P26599 531 aaKnown RBP eCLIP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 HOXA6P31267 233 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CYP2C18P33260 490 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 IL15P40933 162 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 EIF2DP41214 584 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CASP3P42574 277 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 HSPA13P48723 471 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 STARP49675 285 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CLCN4P51793 760 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 BMXP51813 675 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 AGFG1P52594 562 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 ATXN3P54252 364 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 PMS2P54278 862 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 GSDMDP57764 484 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 LOXL3P58215 753 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 KRTAP10-7P60409 375 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CYP4F2P78329 520 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 OTUD4Q01804 1114 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 PRKCEQ02156 737 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 NCBP1Q09161 790 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 TEFQ10587 303 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 TBL3Q12788 808 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 LMAN2Q12907 356 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 GPM6BQ13491 265 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 BYSLQ13895 437 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CBFBQ13951 182 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CASP8Q14790 479 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 ZMYND11Q15326 602 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 MPEG1Q2M385 716 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 TYSND1Q2T9J0 566 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 DUSP28Q4G0W2 176 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 MDH1BQ5I0G3 518 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 SPATA46Q5T0L3 261 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CLEC2AQ6UVW9 174 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CYP20A1Q6UW02 462 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 ZNF704Q6ZNC4 412 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CATSPERGQ6ZRH7 1159 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 MSANTD1Q6ZTZ1 278 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 TRMT10CQ7L0Y3 403 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 SZRD1Q7Z422 152 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 PPP1R32Q7Z5V6 425 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 GPR142Q7Z601 462 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CPLX4Q7Z7G2 160 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 GLRX5Q86SX6 157 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 CHD1LQ86WJ1 897 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 PHC2Q8IXK0 858 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 FBXW8Q8N3Y1 598 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 ZNF321PQ8N8H1 164 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 SYT2Q8N9I0 419 aaPredicted RBP4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 OR13C2Q8NGS9 318 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 HUS1BQ8NHY5 278 aa4.25□□□□□ -1.73
R3HDM1-217ENST00000486532 PPP1R35Q8TAP8 253 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms