RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TRNAU1APQ9NX07 287 aaKnown RBP15.15■□□□□ 0.02
U2AF1-211ENST00000486519 LNPEPQ9UIQ6 1025 aa15.15■□□□□ 0.02
U2AF1-211ENST00000486519 NEU3Q9UQ49 428 aa15.15■□□□□ 0.02
U2AF1-211ENST00000486519 ATP8A1Q9Y2Q0 1164 aa15.15■□□□□ 0.02
U2AF1-211ENST00000486519 MFHAS1Q9Y4C4 1052 aa15.15■□□□□ 0.02
U2AF1-211ENST00000486519 PIKFYVEQ9Y2I7 2098 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 F5H423 210 aaPredicted RBP15.14■□□□□ 0.01
U2AF1-211ENST00000486519 ZNF185O15231 689 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 MYCLP1P12525 358 aaPredicted RBP15.14■□□□□ 0.01
U2AF1-211ENST00000486519 FASLGP48023 281 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 FMO5P49326 533 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 CUL4AQ13619 759 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 RAPGEF1Q13905 1077 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 NLRP14Q86W24 1093 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 ZNF295-AS1Q8N0V1 137 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 FNIP1Q8TF40 1166 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 OR6C1Q96RD1 312 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 TBC1D10AQ9BXI6 508 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 LHX9Q9NQ69 397 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 PHTF1Q9UMS5 762 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 CNTN6Q9UQ52 1028 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 OSGIN2Q9Y236 505 aa15.14■□□□□ 0.01
U2AF1-211ENST00000486519 PCYT1BQ9Y5K3 369 aaPredicted RBP15.14■□□□□ 0.01
U2AF1-211ENST00000486519 THAP12O43422 761 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 YEATS4O95619 227 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 IGSF6O95976 241 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 RECKO95980 971 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 KRT5P13647 590 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 GARSP41250 739 aaKnown RBP15.13■□□□□ 0.01
U2AF1-211ENST00000486519 SEPHS1P49903 392 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 PMS1P54277 932 aaKnown RBP15.13■□□□□ 0.01
U2AF1-211ENST00000486519 RHOAP61586 193 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 DEUP1Q05D60 604 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 MTA1Q13330 715 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 FOXD4L6Q3SYB3 417 aaPredicted RBP15.13■□□□□ 0.01
U2AF1-211ENST00000486519 FOXD4L3Q6VB84 417 aaPredicted RBP15.13■□□□□ 0.01
U2AF1-211ENST00000486519 CAMK1DQ8IU85 385 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 RASGRP3Q8IV61 690 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 IQCKQ8N0W5 287 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 NT5C3BQ969T7 300 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 BARD1Q99728 777 aaKnown RBP15.13■□□□□ 0.01
U2AF1-211ENST00000486519 BRD8Q9H0E9 1235 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 SUV39H2Q9H5I1 410 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 NOL6Q9H6R4 1146 aaKnown RBP15.13■□□□□ 0.01
U2AF1-211ENST00000486519 FAM13BQ9NYF5 915 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 FER1L5A0AVI2 2057 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 MYO7BQ6PIF6 2116 aa15.13■□□□□ 0.01
U2AF1-211ENST00000486519 FAM72CH0Y354 149 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 E2F3O00716 465 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 CETN3O15182 167 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 BUB1O43683 1085 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 SPAG6O75602 509 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 VARSP26640 1264 aaKnown RBP15.12■□□□□ 0.01
U2AF1-211ENST00000486519 NDST2P52849 883 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 ELOAQ14241 798 aaKnown RBP15.12■□□□□ 0.01
U2AF1-211ENST00000486519 CYTH1Q15438 398 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 PTPN20Q4JDL3 420 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 FAM72AQ5TYM5 149 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 MANEALQ5VSG8 457 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 FAM72DQ6L9T8 149 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 DOK6Q6PKX4 331 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 C11orf57Q6ZUT1 292 aaPredicted RBP15.12■□□□□ 0.01
U2AF1-211ENST00000486519 SLC26A9Q7LBE3 791 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 FAM72BQ86X60 149 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 RHOT1Q8IXI2 618 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 SFRP1Q8N474 314 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 THAP4Q8WY91 577 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 NSMCE3Q96MG7 304 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 TEX101Q9BY14 249 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 OGFRQ9NZT2 677 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 PADI1Q9ULC6 663 aa15.12■□□□□ 0.01
U2AF1-211ENST00000486519 HEATR9A2RTY3 570 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 KDELR3O43731 214 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 ITGA3P26006 1051 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 CLCN1P35523 988 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 NOP2P46087 812 aaKnown RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 RGRP47804 291 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 SUOXP51687 545 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 SLC6A3Q01959 620 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 RAD51Q06609 339 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 FOXD4L5Q5VV16 416 aaPredicted RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 ERAP2Q6P179 960 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 FAM131BQ86XD5 332 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 C1orf131Q8NDD1 294 aaKnown RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 ADAMTS17Q8TE56 1095 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 FOXD4L4Q8WXT5 416 aaPredicted RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 NANOS1Q8WY41 292 aaKnown RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 PGAP3Q96FM1 320 aaPredicted RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 NCAPGQ9BPX3 1015 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 GTPBP4Q9BZE4 634 aaKnown RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 SCAND2PQ9GZW5 306 aaPredicted RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 COPG2Q9UBF2 871 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 PPARGC1AQ9UBK2 798 aaKnown RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 PCDHGB7Q9Y5F8 929 aa15.11■□□□□ 0.01
U2AF1-211ENST00000486519 MN1Q10571 1320 aaPredicted RBP15.11■□□□□ 0.01
U2AF1-211ENST00000486519 CXorf51AA0A1B0GTR3 108 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 PRICKLE3O43900 615 aaPredicted RBP15.1■□□□□ 0.01
U2AF1-211ENST00000486519 ANKRD34CP0C6C1 535 aa15.1■□□□□ 0.01
U2AF1-211ENST00000486519 ELFN1P0C7U0 828 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms