RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ARHGEF7Q14155 803 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 GRM3Q14832 879 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 LPAL2Q16609 132 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 USP39Q53GS9 565 aaKnown RBP5.65□□□□□ -1.5
COPS3-208ENST00000486032 ANKRD22Q5VYY1 191 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 ERAP2Q6P179 960 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 KDELC1Q6UW63 502 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 CEP68Q76N32 757 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 ARMCX6Q7L4S7 300 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 MAATS1Q7Z4T9 603 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 RASSF3Q86WH2 238 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 NDUFAF2Q8N183 169 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 CAMKK1Q8N5S9 505 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 BLOC1S5Q8TDH9 187 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 CXorf40AQ8TE69 158 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 RTP4Q96DX8 246 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 TOE1Q96GM8 510 aaKnown RBP5.65□□□□□ -1.5
COPS3-208ENST00000486032 LRIG1Q96JA1 1093 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 ZNF641Q96N77 438 aaPredicted RBP5.65□□□□□ -1.5
COPS3-208ENST00000486032 MYOCQ99972 504 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 GORASP1Q9BQQ3 440 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 RHOXF2Q9BQY4 288 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 IER2Q9BTL4 223 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 GPR174Q9BXC1 333 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 CPEB1Q9BZB8 566 aaKnown RBP5.65□□□□□ -1.5
COPS3-208ENST00000486032 BTBD1Q9H0C5 482 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 FBRSQ9HAH7 460 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 CD248Q9HCU0 757 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 PCDH12Q9NPG4 1184 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 ITM2CQ9NQX7 267 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 B4GALT6Q9UBX8 382 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.65□□□□□ -1.5
COPS3-208ENST00000486032 PCYOX1Q9UHG3 505 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 GGT7Q9UJ14 662 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 SCML1Q9UN30 329 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 SHOC2Q9UQ13 582 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 COQ6Q9Y2Z9 468 aa5.65□□□□□ -1.5
COPS3-208ENST00000486032 UTP11Q9Y3A2 253 aaKnown RBP5.65□□□□□ -1.5
COPS3-208ENST00000486032 V9GYY5 206 aaPredicted RBP5.65□□□□□ -1.5
COPS3-208ENST00000486032 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 IGHV1OR15-9A0A0B4J2B8 117 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 C1orf232A0A0U1RR37 186 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 A0A1W2PQ67 120 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ESYT3A0FGR9 886 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 MEI4A8MW99 385 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 TRAFD1O14545 582 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 DNALI1O14645 258 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 SLC31A1O15431 190 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 HTRA2O43464 458 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 LZTS3O60299 673 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 FZD6O60353 706 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 RNGTTO60942 597 aaKnown RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 SOCS5O75159 536 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ZNF217O75362 1048 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 TMEM63AO94886 807 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SLU7O95391 586 aaKnown RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 CLDN7O95471 211 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SEMA4FO95754 770 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 AP2A1O95782 977 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 NDST3O95803 873 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 PRLP01236 227 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SP9P0CG40 484 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 BCKDHBP21953 392 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 MAOBP27338 520 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 CD6P30203 668 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 VIPR1P32241 457 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 HNF1BP35680 557 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 GRIA1P42261 906 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 DHPSP49366 369 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 ITGA8P53708 1063 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ADPRHP54922 357 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 POLR2LP62875 67 aaKnown RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 RPL6Q02878 288 aaKnown RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 ZBTB16Q05516 673 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 CCDC15Q0P6D6 951 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 CALCOCO2Q13137 446 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SEMA5AQ13591 1074 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 POU6F1Q14863 301 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ACOX1Q15067 660 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SLC1A5Q15758 541 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SMAD1Q15797 465 aaKnown RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 UGP2Q16851 508 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 CCDC38Q502W7 563 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 RALGPS1Q5JS13 557 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SIRPB2Q5JXA9 342 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 HP1BP3Q5SSJ5 553 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 PIP5KL1Q5T9C9 394 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 AGBL4Q5VU57 503 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ALG1LQ6GMV1 187 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 NAPEPLDQ6IQ20 393 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 CASC4Q6P4E1 433 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 BRAT1Q6PJG6 821 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 C4orf22Q6V702 233 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 PRR23BQ6ZRT6 265 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SYDE1Q6ZW31 735 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 USP45Q70EL2 814 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ASCL5Q7RTU5 278 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ZNF572Q7Z3I7 529 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 TSPAN33Q86UF1 283 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms