RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TADA1Q96BN2 335 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 THAP11Q96EK4 314 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 DTD2Q96FN9 168 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 OLFM3Q96PB7 478 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 SRPK1Q96SB4 655 aaKnown RBP7.01□□□□□ -1.29
VPS50-218ENST00000485994 RBM15Q96T37 977 aaKnown RBP eCLIP7.01□□□□□ -1.29
VPS50-218ENST00000485994 SEMA3CQ99985 751 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 TEX101Q9BY14 249 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 CLPBQ9H078 707 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 RBSNQ9H1K0 784 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 CCDC86Q9H6F5 360 aaKnown RBP7.01□□□□□ -1.29
VPS50-218ENST00000485994 NT5MQ9NPB1 228 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 WDR70Q9NW82 654 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 APOBEC3BQ9UH17 382 aaKnown RBP7.01□□□□□ -1.29
VPS50-218ENST00000485994 COQ6Q9Y2Z9 468 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 PCDHA13Q9Y5I0 950 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 RAI2Q9Y5P3 530 aa7.01□□□□□ -1.29
VPS50-218ENST00000485994 EPN1Q9Y6I3 576 aaPredicted RBP7.01□□□□□ -1.29
VPS50-218ENST00000485994 WDFY3Q8IZQ1 3526 aa7□□□□□ -1.29
VPS50-218ENST00000485994 KIF26BQ2KJY2 2108 aa7□□□□□ -1.29
VPS50-218ENST00000485994 LRRD1A4D1F6 860 aa7□□□□□ -1.29
VPS50-218ENST00000485994 ANKRD66B4E2M5 251 aa7□□□□□ -1.29
VPS50-218ENST00000485994 CACNB4O00305 520 aaPredicted RBP7□□□□□ -1.29
VPS50-218ENST00000485994 APOL1O14791 398 aa7□□□□□ -1.29
VPS50-218ENST00000485994 PPP1R12AO14974 1030 aaPredicted RBP7□□□□□ -1.29
VPS50-218ENST00000485994 PJA2O43164 708 aa7□□□□□ -1.29
VPS50-218ENST00000485994 MTSS1O43312 755 aa7□□□□□ -1.29
VPS50-218ENST00000485994 OPA1O60313 960 aa7□□□□□ -1.29
VPS50-218ENST00000485994 TCEA3O75764 348 aa7□□□□□ -1.29
VPS50-218ENST00000485994 ZRANB2O95218 330 aaKnown RBP eCLIP7□□□□□ -1.29
VPS50-218ENST00000485994 NDUFA10O95299 355 aa7□□□□□ -1.29
VPS50-218ENST00000485994 MT-CO3P00414 261 aa7□□□□□ -1.29
VPS50-218ENST00000485994 EPOP01588 193 aa7□□□□□ -1.29
VPS50-218ENST00000485994 JCHAINP01591 159 aa7□□□□□ -1.29
VPS50-218ENST00000485994 PRKCGP05129 697 aa7□□□□□ -1.29
VPS50-218ENST00000485994 ANXA6P08133 673 aa7□□□□□ -1.29
VPS50-218ENST00000485994 MMP2P08253 660 aa7□□□□□ -1.29
VPS50-218ENST00000485994 COMTP21964 271 aa7□□□□□ -1.29
VPS50-218ENST00000485994 CDKN2BP42772 138 aa7□□□□□ -1.29
VPS50-218ENST00000485994 MAXP61244 160 aa7□□□□□ -1.29
VPS50-218ENST00000485994 DAB2P98082 770 aa7□□□□□ -1.29
VPS50-218ENST00000485994 NIPAL4Q0D2K0 466 aa7□□□□□ -1.29
VPS50-218ENST00000485994 TARDBPQ13148 414 aaKnown RBP eCLIP7□□□□□ -1.29
VPS50-218ENST00000485994 PEX6Q13608 980 aa7□□□□□ -1.29
VPS50-218ENST00000485994 ARHGEF7Q14155 803 aa7□□□□□ -1.29
VPS50-218ENST00000485994 TFDP2Q14188 446 aa7□□□□□ -1.29
VPS50-218ENST00000485994 SPA17Q15506 151 aa7□□□□□ -1.29
VPS50-218ENST00000485994 CNGA3Q16281 694 aa7□□□□□ -1.29
VPS50-218ENST00000485994 CDKN3Q16667 212 aa7□□□□□ -1.29
VPS50-218ENST00000485994 ALG11Q2TAA5 492 aa7□□□□□ -1.29
VPS50-218ENST00000485994 PRRT3Q5FWE3 981 aa7□□□□□ -1.29
VPS50-218ENST00000485994 TFDP3Q5H9I0 405 aa7□□□□□ -1.29
VPS50-218ENST00000485994 C11orf63Q6NUN7 778 aa7□□□□□ -1.29
VPS50-218ENST00000485994 IGF2-ASQ6U949 168 aa7□□□□□ -1.29
VPS50-218ENST00000485994 CRTC1Q6UUV9 634 aa7□□□□□ -1.29
VPS50-218ENST00000485994 MFSD7Q6UXD7 560 aa7□□□□□ -1.29
VPS50-218ENST00000485994 C17orf82Q86X59 251 aaPredicted RBP7□□□□□ -1.29
VPS50-218ENST00000485994 KATNAL2Q8IYT4 538 aa7□□□□□ -1.29
VPS50-218ENST00000485994 PLA2G15Q8NCC3 412 aa7□□□□□ -1.29
VPS50-218ENST00000485994 CCNYQ8ND76 341 aa7□□□□□ -1.29
VPS50-218ENST00000485994 GPR156Q8NFN8 814 aa7□□□□□ -1.29
VPS50-218ENST00000485994 EXD1Q8NHP7 514 aa7□□□□□ -1.29
VPS50-218ENST00000485994 DTX3LQ8TDB6 740 aa7□□□□□ -1.29
VPS50-218ENST00000485994 GPBAR1Q8TDU6 330 aa7□□□□□ -1.29
VPS50-218ENST00000485994 LMX1AQ8TE12 382 aa7□□□□□ -1.29
VPS50-218ENST00000485994 NAT6Q93015 286 aa7□□□□□ -1.29
VPS50-218ENST00000485994 FUBP1Q96AE4 644 aaKnown RBP7□□□□□ -1.29
VPS50-218ENST00000485994 WDR92Q96MX6 357 aa7□□□□□ -1.29
VPS50-218ENST00000485994 ZNF830Q96NB3 372 aaPredicted RBP7□□□□□ -1.29
VPS50-218ENST00000485994 VAT1Q99536 393 aa7□□□□□ -1.29
VPS50-218ENST00000485994 LGMNQ99538 433 aa7□□□□□ -1.29
VPS50-218ENST00000485994 LRRC61Q9BV99 259 aa7□□□□□ -1.29
VPS50-218ENST00000485994 TDRD1Q9BXT4 1180 aaKnown RBP7□□□□□ -1.29
VPS50-218ENST00000485994 CDH19Q9H159 772 aa7□□□□□ -1.29
VPS50-218ENST00000485994 SLC25A51Q9H1U9 297 aa7□□□□□ -1.29
VPS50-218ENST00000485994 PCDH9Q9HC56 1237 aa7□□□□□ -1.29
VPS50-218ENST00000485994 TRNAU1APQ9NX07 287 aaKnown RBP7□□□□□ -1.29
VPS50-218ENST00000485994 IMPACTQ9P2X3 320 aa7□□□□□ -1.29
VPS50-218ENST00000485994 PADI4Q9UM07 663 aa7□□□□□ -1.29
VPS50-218ENST00000485994 CLCA2Q9UQC9 943 aa7□□□□□ -1.29
VPS50-218ENST00000485994 PTPRQQ9UMZ3 2332 aa7□□□□□ -1.29
VPS50-218ENST00000485994 CFAP47Q6ZTR5 3102 aa7□□□□□ -1.29
VPS50-218ENST00000485994 TMEM202A6NGA9 273 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 NPIPB15A6NHN6 443 aaPredicted RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 HACD1B0YJ81 288 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 NTN3O00634 580 aaPredicted RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 FFAR2O15552 330 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 NEBLO76041 1014 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 DXOO77932 396 aaKnown RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 HLA-DQB2P05538 268 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 CEACAM5P06731 702 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 IVLP07476 585 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 MYCLP1P12525 358 aaPredicted RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 CTSEP14091 401 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 TGM2P21980 687 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 LHCGRP22888 699 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 CDC25BP30305 580 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 GMPRP36959 345 aa6.99□□□□□ -1.29
VPS50-218ENST00000485994 NOP2P46087 812 aaKnown RBP6.99□□□□□ -1.29
VPS50-218ENST00000485994 STC1P52823 247 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms