RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 LRRC8AQ8IWT6 810 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 NRSN1Q8IZ57 195 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 GALNT15Q8N3T1 639 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 FSTL5Q8N475 847 aaPredicted RBP12.5□□□□□ -0.41
PTCD1-205ENST00000485746 ACTL9Q8TC94 416 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 ALG3Q92685 438 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 FUBP1Q96AE4 644 aaKnown RBP12.5□□□□□ -0.41
PTCD1-205ENST00000485746 APOLD1Q96LR9 279 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 CNTNAP3BQ96NU0 1288 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 ALS2CR12Q96Q35 445 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 CNTNAP3Q9BZ76 1288 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 GPR63Q9BZJ6 419 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 GRPEL1Q9HAV7 217 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 CYP4F12Q9HCS2 524 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 RSPH14Q9UHP6 348 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 TRHDEQ9UKU6 1024 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 NEUROG3Q9Y4Z2 214 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 PCDHGA1Q9Y5H4 931 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 ASCC3Q8N3C0 2202 aaKnown RBP12.49□□□□□ -0.41
PTCD1-205ENST00000485746 TRPM6Q9BX84 2022 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 KCNN4O15554 427 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 MT-CYBP00156 380 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-205ENST00000485746 PYGLP06737 847 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 HOXC4P09017 264 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-205ENST00000485746 RBP3P10745 1247 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 MYCLP1P12525 358 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-205ENST00000485746 JUPP14923 745 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 GM2AP17900 193 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 PTPN7P35236 360 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 TRIM23P36406 574 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 RPIAP49247 311 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 ACADVLP49748 655 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 STC1P52823 247 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 WASHC5Q12768 1159 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 PRPSAP1Q14558 356 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 NR0B2Q15466 257 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 PROX2Q3B8N5 592 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 SEL1L2Q5TEA6 688 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 ITPRIPL1Q6GPH6 555 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 ZCCHC8Q6NZY4 707 aaKnown RBP12.49□□□□□ -0.41
PTCD1-205ENST00000485746 DOK6Q6PKX4 331 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 TECPR1Q7Z6L1 1165 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 TAF8Q7Z7C8 310 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 HEATR4Q86WZ0 1026 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 ZNF567Q8N184 647 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 SLC25A41Q8N5S1 370 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 TTC13Q8NBP0 860 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 FAM118BQ9BPY3 351 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 LRRC61Q9BV99 259 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 LGR4Q9BXB1 951 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 ABCG8Q9H221 673 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 C10orf88Q9H8K7 445 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 ZFYVE1Q9HBF4 777 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 LZTFL1Q9NQ48 299 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 TOR4AQ9NXH8 423 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 NCKIPSDQ9NZQ3 722 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 GULP1Q9UBP9 304 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 SHOC2Q9UQ13 582 aa12.49□□□□□ -0.41
PTCD1-205ENST00000485746 CPED1A4D0V7 1026 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 TMEM202A6NGA9 273 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 LMO7DNF2Z398 122 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 TPP1O14773 563 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 TNFRSF10CO14798 259 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 YY2O15391 372 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 DDX3YO15523 660 aaKnown RBP12.48□□□□□ -0.41
PTCD1-205ENST00000485746 GCATO75600 419 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 ZNF189O75820 626 aaPredicted RBP12.48□□□□□ -0.41
PTCD1-205ENST00000485746 ASMTLO95671 621 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 NDST3O95803 873 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 PIRTP0C851 137 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 MYF5P13349 255 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 ACP1P24666 158 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 GEMP55040 296 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 WNT3AP56704 352 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 CDK3Q00526 305 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 E2F1Q01094 437 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 ILKQ13418 452 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 SLC14A2Q15849 920 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 RFLNAQ6ZTI6 216 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 LYSMD3Q7Z3D4 306 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 PELI3Q8N2H9 469 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 CBARPQ8N350 705 aaPredicted RBP12.48□□□□□ -0.41
PTCD1-205ENST00000485746 IPMKQ8NFU5 416 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 OR1E3Q8WZA6 343 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 SCAMP4Q969E2 229 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 TBATAQ96M53 351 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 SRPK1Q96SB4 655 aaKnown RBP12.48□□□□□ -0.41
PTCD1-205ENST00000485746 RIOK2Q9BVS4 552 aaKnown RBP12.48□□□□□ -0.41
PTCD1-205ENST00000485746 FSD1LQ9BXM9 530 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 CLPBQ9H078 707 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 ABCG4Q9H172 646 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 FAM83DQ9H4H8 585 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 CARS2Q9HA77 564 aaKnown RBP12.48□□□□□ -0.41
PTCD1-205ENST00000485746 USP29Q9HBJ7 922 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 MRPL40Q9NQ50 206 aaKnown RBP12.48□□□□□ -0.41
PTCD1-205ENST00000485746 RAD18Q9NS91 495 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 SIRPGQ9P1W8 387 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 GPR34Q9UPC5 381 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 MSRB2Q9Y3D2 182 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 CAPN6Q9Y6Q1 641 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms