RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 POLD2P49005 469 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 MAPK10P53779 464 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 OR1D5P58170 312 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 CDK3Q00526 305 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 AMZ1Q400G9 498 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 PHF19Q5T6S3 580 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 Q6ZVL8 140 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 ZFAND4Q86XD8 727 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 BBS5Q8N3I7 341 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 ATPAF2Q8N5M1 289 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 USP7Q93009 1102 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 BTBD6Q96KE9 485 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 CMKLR1Q99788 373 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 GSDMCQ9BYG8 508 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 PCDH18Q9HCL0 1135 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 GOLGA6AQ9NYA3 693 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 FOXJ2Q9P0K8 574 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 TAAR2Q9P1P5 351 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 SUFUQ9UMX1 484 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 ST14Q9Y5Y6 855 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 SCN8AQ9UQD0 1980 aa19.22■□□□□ 0.67
COL27A1-205ENST00000485397 A0A1B0GTH6 734 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 PGLSO95336 258 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 LIPCP11150 499 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 CTPS1P17812 591 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 MMP13P45452 471 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 ILF3Q12906 894 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL27A1-205ENST00000485397 C16orf72Q14CZ0 275 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 MAP9Q49MG5 647 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 RAET1GQ6H3X3 334 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 RFLNAQ6ZTI6 216 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 USP53Q70EK8 1073 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 PATE1Q8WXA2 126 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 TMEM159Q96B96 161 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 SCRN2Q96FV2 425 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 SMIM14Q96QK8 99 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 TRNAU1APQ9NX07 287 aaKnown RBP19.21■□□□□ 0.67
COL27A1-205ENST00000485397 KCTD5Q9NXV2 234 aa19.21■□□□□ 0.67
COL27A1-205ENST00000485397 RHPN2P1A8MT19 583 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 C9orf172C9J069 976 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 PSMD11O00231 422 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 ECEL1O95672 775 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 CPNE6O95741 557 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 NFKBIAP25963 317 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 ALDH4A1P30038 563 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 ARMC12Q5T9G4 340 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 MARC1Q5VT66 337 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 DOK6Q6PKX4 331 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 SLC30A9Q6PML9 568 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 ZNF438Q7Z4V0 828 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 TECPR1Q7Z6L1 1165 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 VASH2Q86V25 355 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 PIM3Q86V86 326 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 EXD3Q8N9H8 876 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 NSMCE1Q8WV22 266 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 PIH1D2Q8WWB5 315 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 MCCC1Q96RQ3 725 aaPredicted RBP19.2■□□□□ 0.66
COL27A1-205ENST00000485397 NUDT22Q9BRQ3 303 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 NT5MQ9NPB1 228 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 CD84Q9UIB8 345 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 PLEKHM1Q9Y4G2 1056 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 ATMQ13315 3056 aa19.2■□□□□ 0.66
COL27A1-205ENST00000485397 PYCARD-AS1I3L0S3 204 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 PDHA1P08559 390 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 CCL4P13236 92 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 CDH6P55285 790 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 CTBSQ01459 385 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 SLC25A11Q02978 314 aaKnown RBP19.19■□□□□ 0.66
COL27A1-205ENST00000485397 MMRN1Q13201 1228 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 PIGHQ14442 188 aaPredicted RBP19.19■□□□□ 0.66
COL27A1-205ENST00000485397 NR1I3Q14994 352 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 LINC00303Q3SY05 128 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 RALGPS1Q5JS13 557 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 HGSNATQ68CP4 663 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 ZNF574Q6ZN55 896 aaPredicted RBP19.19■□□□□ 0.66
COL27A1-205ENST00000485397 TEKT4Q8WW24 435 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 SGF29Q96ES7 293 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 THAP2Q9H0W7 228 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 SLC17A4Q9Y2C5 497 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 PPIL1Q9Y3C6 166 aa19.19■□□□□ 0.66
COL27A1-205ENST00000485397 SOD1P00441 154 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 IVLP07476 585 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 IL4RP24394 825 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 TEAD1P28347 426 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 CD1CP29017 333 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 SERPINB6P35237 376 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 ADCY8P40145 1251 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 GPR1P46091 355 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 ZNF165P49910 485 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 NR1D2Q14995 579 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 TDRD12Q587J7 1177 aaKnown RBP19.18■□□□□ 0.66
COL27A1-205ENST00000485397 MANEAQ5SRI9 462 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 USP45Q70EL2 814 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 NAGSQ8N159 534 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 TEX26Q8N6G2 289 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 RCBTB1Q8NDN9 531 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 SEMA3CQ99985 751 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 ABCG8Q9H221 673 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 TMEM98Q9Y2Y6 226 aa19.18■□□□□ 0.66
COL27A1-205ENST00000485397 PPM1DO15297 605 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms