RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TYW5A2RUC4 315 aaKnown RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 KPNA3O00505 521 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 FPGTO14772 594 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 MCF2LO15068 1137 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 IRAK2O43187 625 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 ACSL4O60488 711 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 RAD1O60671 282 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 IDEP14735 1019 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 ATF4P18848 351 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 TCN2P20062 427 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 L1CAMP32004 1257 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 RECQLP46063 649 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 MAPKAPK2P49137 400 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 SLC11A2P49281 568 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 CASP4P49662 377 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 COPB1P53618 953 aaKnown RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 CORO7P57737 925 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 CYP24A1Q07973 514 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 PSMD6Q15008 389 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 ARHGAP44Q17R89 818 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 NADK2Q4G0N4 442 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 PRR30Q53SZ7 412 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 FAXCQ5TGI0 409 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 TCERG1LQ5VWI1 586 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 UNC93AQ86WB7 457 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 HJURPQ8NCD3 748 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 RCBTB1Q8NDN9 531 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 PCDH19Q8TAB3 1148 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 RNF139Q8WU17 664 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 STARD8Q92502 1023 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 KIAA1143Q96AT1 154 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 ANAPC16Q96DE5 110 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 RCC1LQ96I51 464 aaKnown RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 DUSP16Q9BY84 665 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 B3GNT4Q9C0J1 378 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 RDH14Q9HBH5 336 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 KIAA1586Q9HCI6 787 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 OLA1Q9NTK5 396 aaKnown RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 TLK1Q9UKI8 766 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 PNMA8BQ9ULN7 279 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-210ENST00000485247 NAALADL1Q9UQQ1 740 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 B3GALT1Q9Y5Z6 326 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 MTORP42345 2549 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 NYNRINQ9P2P1 1898 aaKnown RBP5.41□□□□□ -1.54
PTPN4-210ENST00000485247 SHANK1Q9Y566 2161 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 HIVEP3Q5T1R4 2406 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 LOC101059948A0A1B0GTJ6 334 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 RNF103O00237 685 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 SLC26A4O43511 780 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 TRIM13O60858 407 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 PPM1BO75688 479 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 LUC7L3O95232 432 aaKnown RBP5.41□□□□□ -1.54
PTPN4-210ENST00000485247 ZBED1O96006 694 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 CTSLP07711 333 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 FGF3P11487 239 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-210ENST00000485247 P4HA1P13674 534 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 PDGFRAP16234 1089 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 GAP43P17677 238 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 TRIM21P19474 475 aaKnown RBP5.41□□□□□ -1.54
PTPN4-210ENST00000485247 CYP2J2P51589 502 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 TKTL1P51854 596 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 THOP1P52888 689 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 PFN3P60673 137 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 IRX6P78412 446 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-210ENST00000485247 CCDC15Q0P6D6 951 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 ALCAMQ13740 583 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 NR1I3Q14994 352 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 DLG2Q15700 870 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 INPP5JQ15735 1006 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-210ENST00000485247 MAP9Q49MG5 647 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 BSPRYQ5W0U4 402 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 BICRALQ6AI39 1079 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 SP5Q6BEB4 398 aaPredicted RBP5.41□□□□□ -1.54
PTPN4-210ENST00000485247 NADSYN1Q6IA69 706 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 PAQR3Q6TCH7 311 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 BHLHA9Q7RTU4 235 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 PIGZQ86VD9 579 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 FAM129CQ86XR2 697 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 UNC45BQ8IWX7 931 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 OR6C4Q8NGE1 309 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 ART4Q93070 314 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 C20orf173Q96LM9 149 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 AK8Q96MA6 479 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 KCNC2Q96PR1 638 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 HAPLN3Q96S86 360 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 LGR4Q9BXB1 951 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 ULBP1Q9BZM6 244 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 INTS2Q9H0H0 1204 aaKnown RBP5.41□□□□□ -1.54
PTPN4-210ENST00000485247 DYRK4Q9NR20 520 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 OLFML3Q9NRN5 406 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 RRN3Q9NYV6 651 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 LUZP4Q9P127 313 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 PHTF1Q9UMS5 762 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 GPR34Q9UPC5 381 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 ENTPD4Q9Y227 616 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 PCDHGA3Q9Y5H0 932 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 UNC13CQ8NB66 2214 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 APCP25054 2843 aa5.41□□□□□ -1.54
PTPN4-210ENST00000485247 ABCA2Q9BZC7 2435 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms