RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 TRIM38O00635 465 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 SCAMP1O15126 338 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 SIGLEC6O43699 453 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 RASGRP1O95267 797 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 TRIM16O95361 564 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 NDST3O95803 873 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 PIRTP0C851 137 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 CTSEP14091 401 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 TSHRP16473 764 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 GPR1P46091 355 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 STC1P52823 247 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 KIAA1024LP59773 190 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 SRP54P61011 504 aaKnown RBP19.11■□□□□ 0.65
SNX17-206ENST00000484886 DAB2P98082 770 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 PTSQ03393 145 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 DNAJC3Q13217 504 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 C1orf61Q13536 156 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 RFLNAQ6ZTI6 216 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 SLCO6A1Q86UG4 719 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 PELI3Q8N2H9 469 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 IPMKQ8NFU5 416 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 OR4C6Q8NH72 309 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 AP2M1Q96CW1 435 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 TRIB3Q96RU7 358 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 NLGN3Q9NZ94 848 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 PKD2L2Q9NZM6 624 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 DOLKQ9UPQ8 538 aa19.11■□□□□ 0.65
SNX17-206ENST00000484886 COL5A1P20908 1838 aaPredicted RBP19.11■□□□□ 0.65
SNX17-206ENST00000484886 PDE2AO00408 941 aaPredicted RBP19.1■□□□□ 0.65
SNX17-206ENST00000484886 HYAL3O43820 417 aaPredicted RBP19.1■□□□□ 0.65
SNX17-206ENST00000484886 HK3P52790 923 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 WNT3AP56704 352 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 ALG11Q2TAA5 492 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 DEFB133Q30KQ1 61 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 MEI1Q5TIA1 1274 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 ZNF662Q6ZS27 426 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 LYSMD3Q7Z3D4 306 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 TECPR1Q7Z6L1 1165 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 HEATR4Q86WZ0 1026 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 CBARPQ8N350 705 aaPredicted RBP19.1■□□□□ 0.65
SNX17-206ENST00000484886 CHCHD4Q8N4Q1 142 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 SLC25A41Q8N5S1 370 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 OR56A4Q8NGH8 313 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 SCAMP4Q969E2 229 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 TADA1Q96BN2 335 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 FCRL5Q96RD9 977 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 LYSMD1Q96S90 227 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 LRRC61Q9BV99 259 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 FSD1LQ9BXM9 530 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 ABCG8Q9H221 673 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 GBA3Q9H227 469 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 SUDS3Q9H7L9 328 aaPredicted RBP19.1■□□□□ 0.65
SNX17-206ENST00000484886 PNMA8BQ9ULN7 279 aaPredicted RBP19.1■□□□□ 0.65
SNX17-206ENST00000484886 SHOC2Q9UQ13 582 aa19.1■□□□□ 0.65
SNX17-206ENST00000484886 ZNF189O75820 626 aaPredicted RBP19.09■□□□□ 0.65
SNX17-206ENST00000484886 TOP3BO95985 862 aaKnown RBP19.09■□□□□ 0.65
SNX17-206ENST00000484886 TNFP01375 233 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 ANXA6P08133 673 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 MYCLP1P12525 358 aaPredicted RBP19.09■□□□□ 0.65
SNX17-206ENST00000484886 SPINK2P20155 84 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 TRIM23P36406 574 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 MPP3Q13368 585 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 PRPSAP1Q14558 356 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 ANKRD20A2Q5SQ80 823 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 ANKRD20A1Q5TYW2 823 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 ANKRD20A3Q5VUR7 823 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 NRSN1Q8IZ57 195 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 TRIM58Q8NG06 486 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 UBE2Q2Q8WVN8 375 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 PDXPQ96GD0 296 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 OXNAD1Q96HP4 312 aaPredicted RBP19.09■□□□□ 0.65
SNX17-206ENST00000484886 DUSP23Q9BVJ7 150 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 RIOK2Q9BVS4 552 aaKnown RBP19.09■□□□□ 0.65
SNX17-206ENST00000484886 LGR4Q9BXB1 951 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 GPR63Q9BZJ6 419 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 ZFYVE1Q9HBF4 777 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 CSNK1G3Q9Y6M4 447 aa19.09■□□□□ 0.65
SNX17-206ENST00000484886 TCRBV7S2A1N4TA0A589 114 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 TMEM202A6NGA9 273 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 GCATO75600 419 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 ANXA9O76027 345 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 HOXC4P09017 264 aaPredicted RBP19.08■□□□□ 0.64
SNX17-206ENST00000484886 CKMT2P17540 419 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 GEMP55040 296 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 CDK3Q00526 305 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 DPTQ07507 201 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 KLF1Q13351 362 aaPredicted RBP19.08■□□□□ 0.64
SNX17-206ENST00000484886 ELOCQ15369 112 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 DOK6Q6PKX4 331 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 KDELC1Q6UW63 502 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 ARHGEF18Q6ZSZ5 1173 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 NYAP1Q6ZVC0 841 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 ZNF765Q7L2R6 523 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 FSTL5Q8N475 847 aaPredicted RBP19.08■□□□□ 0.64
SNX17-206ENST00000484886 CCDC110Q8TBZ0 833 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 OR1E3Q8WZA6 343 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 MAGEE1Q9HCI5 957 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 CYP4F12Q9HCS2 524 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 FGF22Q9HCT0 170 aa19.08■□□□□ 0.64
SNX17-206ENST00000484886 MRPL40Q9NQ50 206 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms