RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 RYBPQ8N488 228 aaPredicted RBP14.03□□□□□ -0.16
CLK3-204ENST00000483723 KCTD4Q8WVF5 259 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 C10orf82Q8WW14 230 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 LPGAT1Q92604 370 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 TIFAQ96CG3 184 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 NXNL1Q96CM4 212 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 SCRN2Q96FV2 425 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 AARSD1Q9BTE6 412 aaKnown RBP14.03□□□□□ -0.16
CLK3-204ENST00000483723 GPR63Q9BZJ6 419 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 POPDC3Q9HBV1 291 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 IGSF5Q9NSI5 407 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 THAP1Q9NVV9 213 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 CDH7Q9ULB5 785 aa14.03□□□□□ -0.16
CLK3-204ENST00000483723 TULP3O75386 442 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 SERPINE1P05121 402 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 PRSS56P0CW18 603 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 CD9P21926 228 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 KCNA4P22459 653 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 GRK2P25098 689 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 MC4RP32245 332 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 PTPN5P54829 565 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 CDKN2DP55273 166 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 SF3A3Q12874 501 aaKnown RBP eCLIP14.02□□□□□ -0.162e-6■■■■■ 37.8
CLK3-204ENST00000483723 ZNF460Q14592 562 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 PDGFRLQ15198 375 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 PTPRNQ16849 979 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 ACCSLQ4AC99 568 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 GET4Q7L5D6 327 aaPredicted RBP14.02□□□□□ -0.16
CLK3-204ENST00000483723 C12orf40Q86WS4 652 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 FSTL5Q8N475 847 aaPredicted RBP14.02□□□□□ -0.16
CLK3-204ENST00000483723 CHST14Q8NCH0 376 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 TSNARE1Q96NA8 513 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 MCCC1Q96RQ3 725 aaPredicted RBP14.02□□□□□ -0.16
CLK3-204ENST00000483723 C20orf27Q9GZN8 174 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 KDM4CQ9H3R0 1056 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 ZFYVE1Q9HBF4 777 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 BPIFA1Q9NP55 256 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 CDH22Q9UJ99 828 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 VPS9D1Q9Y2B5 631 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 CRYL1Q9Y2S2 319 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 PKP3Q9Y446 797 aa14.02□□□□□ -0.16
CLK3-204ENST00000483723 A0A0U1RQS6 177 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 DLDP09622 509 aaKnown RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 TROVE2P10155 538 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLK3-204ENST00000483723 RALBP11234 206 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 BMP1P13497 986 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 PMLP29590 882 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 NNMTP40261 264 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 CDKN1CP49918 316 aaPredicted RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 PRKAA2P54646 552 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 ADARP55265 1226 aaKnown RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 FCHO2Q0JRZ9 810 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 TANGO2Q6ICL3 276 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 LRRC8EQ6NSJ5 796 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 PSAPL1Q6NUJ1 521 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 TMEM207Q6UWW9 146 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 ZYG11AQ6WRX3 759 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 TPRG1Q6ZUI0 275 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 Q6ZVU0 165 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 TRPM8Q7Z2W7 1104 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 PIANPQ8IYJ0 282 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 TTC8Q8TAM2 541 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 GRIN3AQ8TCU5 1115 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 HEXDCQ8WVB3 486 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 MYLIPQ8WY64 445 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 HEPHQ9BQS7 1158 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 APOL5Q9BWW9 433 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 TRIM55Q9BYV6 548 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 S1PR5Q9H228 398 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 ECT2Q9H8V3 914 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 KCNK13Q9HB14 408 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 HPS4Q9NQG7 708 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 OXSMQ9NWU1 459 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 THG1LQ9NWX6 298 aaKnown RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 USH1CQ9Y6N9 552 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 TSPAN11A1L157 253 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 OTOL1A6NHN0 477 aaPredicted RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 GAPDHSO14556 408 aaPredicted RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 TRIM13O60858 407 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 NDUFS3O75489 264 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 CLDN7O95471 211 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 ATP5BP06576 529 aaKnown RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 LTA4HP09960 611 aaKnown RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 TTPAP49638 278 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 CACNG1Q06432 222 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 SETMARQ53H47 684 aaPredicted RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 LACTB2Q53H82 288 aaPredicted RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 HABP4Q5JVS0 413 aaKnown RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 RNF187Q5TA31 235 aaPredicted RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 CRTC1Q6UUV9 634 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 VITQ6UXI7 678 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 GDPD4Q6W3E5 623 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 TBC1D1Q86TI0 1168 aaPredicted RBP14.01□□□□□ -0.17
CLK3-204ENST00000483723 TDHQ8IZJ6 230 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 KDM1BQ8NB78 822 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 HCAR2Q8TDS4 363 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 CYB5D2Q8WUJ1 264 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 SORCS1Q8WY21 1168 aa14.01□□□□□ -0.17
CLK3-204ENST00000483723 ZFYVE19Q96K21 471 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms