RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 SLC35B2Q8TB61 432 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 BAHD1Q8TBE0 780 aaPredicted RBP13.38□□□□□ -0.27
SSR1-208ENST00000483409 FUBP1Q96AE4 644 aaKnown RBP13.38□□□□□ -0.27
SSR1-208ENST00000483409 MRGPRX2Q96LB1 330 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 SPATA13Q96N96 652 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 GORASP1Q9BQQ3 440 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 TMEM121Q9BTD3 319 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 TCEAL2Q9H3H9 227 aaPredicted RBP13.38□□□□□ -0.27
SSR1-208ENST00000483409 WDR26Q9H7D7 661 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 SHOC2Q9UQ13 582 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 SPEGQ15772 3267 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 ZFC3H1O60293 1989 aaKnown RBP13.38□□□□□ -0.27
SSR1-208ENST00000483409 H3BM21 787 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 CACNB4O00305 520 aaPredicted RBP13.37□□□□□ -0.27
SSR1-208ENST00000483409 ENC1O14682 589 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 ATXN1LP0C7T5 689 aaKnown RBP13.37□□□□□ -0.27
SSR1-208ENST00000483409 HTR1BP28222 390 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 CXCR5P32302 372 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 CHRNA4P43681 627 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 TNNT3P45378 269 aaPredicted RBP13.37□□□□□ -0.27
SSR1-208ENST00000483409 KIAA1024LP59773 190 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 TCEA2Q15560 299 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 SIRPB2Q5JXA9 342 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 FAXCQ5TGI0 409 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 KCTD16Q68DU8 428 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 HEATR4Q86WZ0 1026 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 HID1Q8IV36 788 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 PHACTR4Q8IZ21 702 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 SLC25A45Q8N413 288 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 ZNF548Q8NEK5 533 aaPredicted RBP13.37□□□□□ -0.27
SSR1-208ENST00000483409 CCHCR1Q8TD31 782 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 C1orf54Q8WWF1 131 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 SCAMP4Q969E2 229 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 TSACCQ96A04 125 aaPredicted RBP13.37□□□□□ -0.27
SSR1-208ENST00000483409 AP2M1Q96CW1 435 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 CDC6Q99741 560 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 LGR4Q9BXB1 951 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 FSD1LQ9BXM9 530 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 ABCG8Q9H221 673 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 KCTD5Q9NXV2 234 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 KLQ9UEF7 1012 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 FTSJ1Q9UET6 329 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 APOBEC3BQ9UH17 382 aaKnown RBP13.37□□□□□ -0.27
SSR1-208ENST00000483409 ZNF711Q9Y462 761 aa13.37□□□□□ -0.27
SSR1-208ENST00000483409 PTPRBP23467 1997 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 LOC285095A0A1B0GVY8 99 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 SCAMP1O15126 338 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 LIASO43766 372 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 ZNF189O75820 626 aaPredicted RBP13.36□□□□□ -0.27
SSR1-208ENST00000483409 ANXA9O76027 345 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 TSHRP16473 764 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 TRIM23P36406 574 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 GPR1P46091 355 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 GEMP55040 296 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 GDF10P55107 478 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 PPARDQ03181 441 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 OLIG2Q13516 323 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 C1orf61Q13536 156 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 SNX1Q13596 522 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 PRPSAP1Q14558 356 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 ALG11Q2TAA5 492 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 PRRT3Q5FWE3 981 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 ZNF569Q5MCW4 686 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 RD3Q7Z3Z2 195 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 SLC35F6Q8N357 371 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 LMX1AQ8TE12 382 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 OR1E3Q8WZA6 343 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 PDXPQ96GD0 296 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 CNDP2Q96KP4 475 aaKnown RBP13.36□□□□□ -0.27
SSR1-208ENST00000483409 WDR92Q96MX6 357 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 AGAP2Q99490 1192 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 LRRC61Q9BV99 259 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 FICDQ9BVA6 458 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 RIOK2Q9BVS4 552 aaKnown RBP13.36□□□□□ -0.27
SSR1-208ENST00000483409 GPR63Q9BZJ6 419 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 SLC13A1Q9BZW2 595 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 ZFYVE1Q9HBF4 777 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 MAGEE1Q9HCI5 957 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 MRPL40Q9NQ50 206 aaKnown RBP13.36□□□□□ -0.27
SSR1-208ENST00000483409 PHPT1Q9NRX4 125 aaPredicted RBP13.36□□□□□ -0.27
SSR1-208ENST00000483409 PKD2L2Q9NZM6 624 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 SPO11Q9Y5K1 396 aa13.36□□□□□ -0.27
SSR1-208ENST00000483409 ARHGEF17Q96PE2 2063 aaPredicted RBP13.36□□□□□ -0.27
SSR1-208ENST00000483409 C5orf60A6NFR6 353 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 TMEM202A6NGA9 273 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 USP27XA6NNY8 438 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 TRIM38O00635 465 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 AQP9O43315 295 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 SIGLEC6O43699 453 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 CEP104O60308 925 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 LDOC1O95751 146 aaPredicted RBP13.35□□□□□ -0.27
SSR1-208ENST00000483409 SOD1P00441 154 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 AGTP01019 485 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 FGGP02679 453 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 ADRB1P08588 477 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 FTH1P19P0C7X4 201 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 MYCLP1P12525 358 aaPredicted RBP13.35□□□□□ -0.27
SSR1-208ENST00000483409 HLA-DPA1P20036 260 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 SPINT3P49223 89 aa13.35□□□□□ -0.27
SSR1-208ENST00000483409 HK3P52790 923 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 276.7 ms