RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DRGXA6NNA5 263 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 BECN2A8MW95 431 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 BIN1O00499 593 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 NEMP1O14524 444 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 FPGTO14772 594 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 TPP1O14773 563 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 AQP9O43315 295 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 SMAD6O43541 496 aaKnown RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 AP1G1O43747 822 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 TCEA3O75764 348 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 NEBLO76041 1014 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ENDOD1O94919 500 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 PAK4O96013 591 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 CSF2P04141 144 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ERBB2P04626 1255 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 SNRPB2P08579 225 aaKnown RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 GIMD1P0DJR0 217 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 MYF5P13349 255 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ADRB3P13945 408 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ITGB7P26010 798 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 CXCR3P49682 368 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 SERPINH1P50454 418 aaKnown RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 BPIFB4P59827 614 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 RNASE9P60153 205 aaKnown RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 POU4F1Q01851 419 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 PDE1CQ14123 709 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 MORC3Q14149 939 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 PTK2BQ14289 1009 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 FZD2Q14332 565 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 NR0B2Q15466 257 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 CDKN3Q16667 212 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ISXQ2M1V0 245 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 C3orf38Q5JPI3 329 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 GJB7Q6PEY0 223 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 RBM44Q6ZP01 1051 aaKnown RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 EFL1Q7Z2Z2 1120 aaKnown RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 SLC22A18ASQ8N1D0 253 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 MFSD4AQ8N468 514 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ARL14Q8N4G2 192 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF655Q8N720 491 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 TMEM35BQ8NCS4 154 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 MSANTD4Q8NCY6 345 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 DENND6BQ8NEG7 585 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF548Q8NEK5 533 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 WDR48Q8TAF3 677 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 LMX1AQ8TE12 382 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 CHAC2Q8WUX2 184 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 NAT6Q93015 286 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 RAB7BQ96AH8 199 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ARHGEF26Q96DR7 871 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 PGAP3Q96FM1 320 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 VCPIP1Q96JH7 1222 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 BMFQ96LC9 184 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 C1orf74Q96LT6 269 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 LENG8Q96PV6 779 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 NPY6RQ99463 290 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 IL12RB2Q99665 862 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 CPNE5Q9HCH3 593 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 ATP13A1Q9HD20 1204 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 MPP6Q9NZW5 540 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 SPASTQ9UBP0 616 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 SATB2Q9UPW6 733 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 MAPRE3Q9UPY8 281 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 GPR55Q9Y2T6 319 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-207ENST00000483407 PCDHGA8Q9Y5G5 932 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 FADS3Q9Y5Q0 445 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 IGSF10Q6WRI0 2623 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 PLXNA2O75051 1894 aa5.96□□□□□ -1.46
CSDE1-207ENST00000483407 IGLV3-10A0A075B6K4 115 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 LY6G6EA0A0G2JKS1 128 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 CXorf51AA0A1B0GTR3 108 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 EME2A4GXA9 379 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 RAD51BO15315 384 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 TSPAN6O43657 245 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 SRGAP2O75044 1071 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 DNAJC8O75937 253 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ANXA6P08133 673 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 C6P13671 934 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 SLC9A1P19634 815 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 TGM2P21980 687 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 PON1P27169 355 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 CCNHP51946 323 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 THOP1P52888 689 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 GEMIN4P57678 1058 aaKnown RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 SNRPD1P62314 119 aaKnown RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 FGL2Q14314 439 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 POLD3Q15054 466 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 DEFB133Q30KQ1 61 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 SLC25A52Q3SY17 297 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 PTPN20Q4JDL3 420 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 CARD16Q5EG05 197 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 FAM102AQ5T9C2 384 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 OTUD1Q5VV17 481 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ESRP1Q6NXG1 681 aaKnown RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 GUSBP11Q6P575 273 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 PCSK4Q6UW60 755 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF765Q7L2R6 523 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 PARS2Q7L3T8 475 aaKnown RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 SLC47A2Q86VL8 602 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF683Q8IZ20 524 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms